Trinickia violacea: FAZ95_04800
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Entry
FAZ95_04800 CDS
T09503
Symbol
lptF
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
tvl
Trinickia violacea
Pathway
tvl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FAZ95_04800 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvl02000
]
FAZ95_04800 (lptF)
Transporters [BR:
tvl02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
FAZ95_04800 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
QCP48565
UniProt:
A0A4P8IM15
LinkDB
All DBs
Position
1:complement(1048333..1049430)
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AA seq
365 aa
AA seq
DB search
MIFERSLQRELAYTAGAVFMVLLTIFLTTLMIRIVGFAASGEVDPKDVVVLIGLQIIGYL
AVMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLVRFIKPIATFSAPIILLVAFFAYVG
WPWSNAQSKLIRERFQQRDEVSLLAAGQFRESPASHRVFFIEKMTPDQSRVENVFVTSTE
NGKVNVVVSNRGHTETMKNGDRFVVLDNGRRYDGEPGKPDFRIMEFERYGVKITSTPVVN
QQTTRGMSTPALFRHPNPDKLAEFAWRTGLPLMAINLMLLGIPLAYQNPRRGRTINLVMA
VLIFFTYSNLLNIVQSYIEQGKLSFAVGLVGLHIVIAALVVFLFWLRVRNRPLISRAMFT
RSQGA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgattttcgaacgctccctgcagcgagaactcgcgtatacggccggtgccgtattcatg
gtgctgctcaccatcttcctgacgacgctgatgatccgcatcgtcggcttcgccgcgtcc
ggcgaggtcgatccgaaggacgtcgtcgtgctgatcggcctgcagatcatcggctatctc
gccgtgatgctcgtcgtcacgctgttcgtctcgatcctcttcgtgctcacgcgctggtac
cgcgactccgaaatggtggtctggctcgcctccggcgtgagcctcgtgcgcttcatcaaa
ccgatcgcgacgttttccgcgccgatcatcctgctcgtcgcgttcttcgcgtacgtcggc
tggccgtggtcgaacgcgcagagcaagctgatccgcgagcgcttccagcagcgcgacgaa
gtttccctgctggcggcgggccagttccgcgaatcgcccgccagccatcgcgtgttcttc
atcgagaagatgacacccgaccagagccgcgtcgaaaacgtcttcgtgacgagcaccgag
aacggcaaggtcaacgtggtcgtgtcgaaccgcggccacactgaaacgatgaagaacggc
gaccgcttcgtcgtgctcgataacggccgccgctacgatggcgagcccggcaagcccgat
ttccgcatcatggagttcgagcgttacggcgtgaagatcacgagcacgccggtcgtgaat
cagcagacgacgcgcggcatgtccacgcccgccctgttccgccatccgaaccccgacaag
ctcgccgaattcgcgtggcgcacgggcctgccgctgatggcgatcaacctgatgctgctg
ggcattccgctcgcctaccagaacccgcgccgcggacgcacgatcaacctggtgatggcc
gtcctgatcttcttcacgtactcgaacctgctcaacatcgtccagtcgtatatcgagcaa
ggcaagctgtcgttcgcggtgggcctggtcggcctgcacatcgtcatcgcggcgctcgtc
gtgttcctgttctggctgcgcgtgcgcaaccggccgctgatttcgcgcgcgatgttcacg
cgctcgcaaggggcctga
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