Trinickia violacea: FAZ95_05200 Help Entry FAZ95_05200       CDS       T09503                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism tvl  Trinickia violacea Pathway tvl02020   Two-component system tvl02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:tvl00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     FAZ95_05200  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     FAZ95_05200  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tvl03021]     FAZ95_05200 Transcription machinery [BR:tvl03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      FAZ95_05200 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR RcsC HTH_23 Motif Other DBs NCBI-ProteinID:  QCP48640 UniProt:  A0A4V1EH10 LinkDB All DBs Position 1:complement(1137955..1139463) Genome browser AA seq 502 aa AA seqDB search MPPILELHHKQHVALTPRLQQSVRLLQLSSLEFEQEVRQALDTNPFLELDEPSTEDAEPP VEGDAEVHPGYEADAAAAAPASAELTPDGAEAAGAASMDAHADEPASDMGEVGEFAADWS TRASTRHNGDADDVDPGSWAHSQPTMHEQLHGFLNVYPLNDRDRVAAQIIIEALDDDGYL RDPLAELTEVCEEADPPLTEEELRVAVRLVQTLDKPGVGARSLSECLSLQLQAMPDDTPG RALALEIAEHHLERLARREHAELQKQTGCSADALRVASMLVRRLDPKPGEAYAHPADNYV VPDVIVRQAKHQWVVAINPAVLPRARIHRVYAEMFAQATGTNASPLGQQLQEARWLLRNA EQRFTTIQRVAECIVAHQKAFFDYGEIALKPLVLREVADELGLHESTVSRASSNKYMATP RGIFEFRHFFPRKLATETGGRCSAAAVRALIKELIAQEDVHDPLSDVSLAKLLAQEGMIV ARRTVAKYRNLMKVPPAQLRQR NT seq 1509 nt NT seq  +upstreamnt  +downstreamnt atgccgcctattctcgaactccatcacaagcagcacgtcgcgctgacgccgcgcctgcaa caatcggtgcgcctcttgcagttgtcttcgctcgaattcgaacaggaagtgcgacaagcg ctcgacacgaatccgttcctcgaactcgacgagccatcgacggaagatgccgagcccccc gtcgagggcgacgcggaggtccaccccgggtatgaagccgacgcggcggctgcggccccc gcctcggccgaattgacgcctgacggcgccgaggccgccggcgccgcctcgatggacgca cacgcggacgaacccgcgagcgacatgggcgaggtaggcgagttcgccgccgactggtcg acgcgcgcgagcacgcggcacaacggcgatgccgacgatgtcgaccccggcagctgggcg cattcgcagccgacgatgcacgagcagctgcatggcttcttgaacgtgtatccgttgaac gaccgcgaccgcgtcgccgcgcagatcatcatcgaagcgctcgacgacgacggttatctg cgcgatccgctcgccgaactcaccgaggtttgcgaagaggccgatccgccgctcaccgaa gaggagctgcgcgtcgcggtgcggctcgtccagacgctcgacaagccgggcgtcggtgcg cgctcgctgtcggaatgcttgagcctgcaattgcaggccatgcccgacgacacgcccggc cgcgcgctcgcactcgaaatcgcggaacaccacctcgaacgcctcgcgcgccgtgagcac gccgaactgcaaaagcagaccggctgctcggccgatgcgctgcgcgtcgcgtccatgctc gtgcggcggctcgatccgaagcctggcgaagcgtacgcgcatcccgccgacaactacgtc gtgccggacgtgatcgtgcggcaggcgaagcatcagtgggtcgtcgcgatcaatccggct gtgctgccgcgcgcgcgcatccaccgcgtgtacgcggagatgttcgcgcaggccacgggc acgaacgcctcgccgctcggccagcagcttcaggaagcgcgctggctgctgcgcaacgcc gagcagcgcttcacgacaatccagcgcgtcgccgaatgcatcgtcgcgcatcagaaggcg ttcttcgactacggcgagatcgcgctcaagccgctcgtgctgcgcgaagtggccgacgag ctcggcctgcacgaatcgacggtctcgcgcgcgtcgagcaacaagtacatggcgacgccg cgcggcatcttcgaattccgccacttcttcccgcgcaagctcgcgaccgaaaccggcgga cgctgctcggccgcggcggtgcgcgcgttgatcaaggagctgatcgcgcaggaggacgtg cacgatccgctctccgacgtgagcctcgcgaagctgctcgcgcaggaaggcatgatcgtc gcgcggcgcacggtcgcgaagtatcggaatctgatgaaggtgccgcctgcgcagttgcgg cagcggtga

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