KEGG   Trinickia violacea: FAZ95_06270
Entry
FAZ95_06270       CDS       T09503                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
tvl  Trinickia violacea
Pathway
tvl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tvl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FAZ95_06270 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tvl03400]
    FAZ95_06270 (uvrB)
DNA repair and recombination proteins [BR:tvl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FAZ95_06270 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      FAZ95_06270 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD AAA_30 Kinesin AAA_16 UB2H AAA_22 DUF7603
Other DBs
NCBI-ProteinID: QCP48826
UniProt: A0A4P8IKR3
LinkDB
Position
1:1366355..1368448
AA seq 697 aa
MSEHHLSPVDDTLDESKFVEFEGSPFHLYQPYPPAGDQPGAIKTLVEGVEDGLSFQTLLG
VTGSGKTFTMANTIAQLGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPE
AYVPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGNPSEYHQMIL
TLRTGDKIGQRDVIARLIAMQYSRNEADFQRGAFRVRGDTIDIFPAEHAEMAVRIELFDD
EVESLQLFDPLTGRVRQKIPRFTVYPSSHYVTPRETVMRAVETIKTELRDRLEFFHQDGK
LVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGAAPGEPPPTLVDYLPPDALMLLDE
SHVLIGQLNGMYNGDRARKENLVDYGFRLPSALDNRPLKFPEFERKMRQAIFVSATPADY
EKKTAGQVAEQVVRPTGLVDPEVEVRPARTQVDDVLSEINARVAAGDRVLVTVLTKRMAE
QLTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAI
LDADKEGFLRAERSLIQTIGRAARNVNGKALLYADRITDSMRRAIDETERRRAKQIAHNE
KMGIVPRGVVKRIKDIIDGVYDADEVRAELKEQQQRAKFEDMSEKQIAKEIKRLEKQMME
HAKNLEFEKAAQVRDQLALLRERVFGANVGDHLTGTD
NT seq 2094 nt   +upstreamnt  +downstreamnt
atgtccgaacaccatctctctccagtcgacgacaccctcgacgaatcgaaattcgtcgag
ttcgaaggctccccgtttcacctgtaccagccgtatccgcctgccggcgatcagcccggc
gcgatcaagacgctcgtcgaaggcgtcgaggacggcctgtcgttccagacgctgctcggc
gtgaccggctccggcaagacgttcacgatggcgaacacgatcgcgcagctcggccgcccg
gccatcgtattcgcgccgaacaaaacgctcgccgcgcagctctactcggagtttcgcgag
ttcttcccgcgtaatgcggtcgagtacttcgtctcgtactacgactactaccagccggaa
gcctatgtgccgcagcgcgacttgttcatcgagaaggattcgtcgatcaacgagcacatc
gagcagatgcggctgtcggcgaccaagagcctgatggagcggcgcgacgtcgtgatcgtg
gcgacggtgtcggcgatctacggtatcggcaatccgtccgagtaccaccagatgattctg
acgctgcgcacgggagacaagatcggccagcgcgacgtcatcgcgcggctgatcgcgatg
cagtacagccgcaacgaagccgattttcagcgcggcgcgttccgcgtgcgtggggacacg
atcgacatcttccctgccgagcacgcggagatggcggtgcgcatcgagctgttcgacgac
gaagtcgagtcgctgcagctgttcgatccgctgacgggccgcgtgcggcagaagattccg
cgcttcaccgtctacccgtcgtcgcactatgtgacaccgcgcgaaaccgtgatgcgcgcg
gtcgagacgatcaagaccgaattgcgcgaccggctcgagttcttccatcaggacggcaag
ctcgtcgaggcgcagcggctcgagcagcgcacgcgcttcgatttggaaatgctgcaggag
ctgggtttctgcaagggcatcgagaactactcgcggcacttttcgggtgcggcgccgggc
gagccgccgccgacgctcgtcgactatctgccgcccgacgcgctgatgctgctcgacgag
tcgcacgtgctgatcggccagctgaacggcatgtacaacggcgaccgggcccgcaaggaa
aatctcgtcgactacgggttccggctgccgtcggcgctcgacaaccggccgctcaagttc
cccgagttcgagcgcaagatgcgccaggcgatcttcgtgtcggcgacaccggccgactac
gagaaaaagaccgcgggccaggtcgccgaacaggtcgtgcggccgaccggcctcgtcgac
cccgaggtcgaagtgcggccggcgcgcacgcaggtcgacgacgtgctctccgagatcaat
gcgcgcgtcgcggccggcgaccgcgtgctcgtcaccgtgctcacgaagcgcatggccgag
cagctaaccgaatttctcgccgaccacggcgtcaaagtgcgctacctgcacagcgatatc
gatacggtcgagcgcgtcgagatcattcgcgacttgcgtctcggcaccttcgacgtgctc
gtcggcatcaacttgctgcgcgaggggctcgacattccggaggtgtcgctcgtcgcgatt
ctcgacgcggacaaggaaggcttcctgcgcgccgagcgttcgctgatccagacgatcggg
cgcgcggcgcgcaacgtcaacggcaaggcgctgttgtacgcggaccggatcaccgattcg
atgcgccgcgcgatcgacgaaaccgagcgccggcgcgcgaagcagatcgcgcacaacgag
aagatgggcatcgtgccgcgcggcgtcgtgaagcggatcaaggacatcatcgacggtgtc
tacgacgccgacgaagtgcgtgcggagctcaaggagcagcaacagcgcgcgaagttcgag
gacatgtccgagaagcagatcgcgaaggagatcaagcggctcgagaagcagatgatggag
cacgcgaagaatctcgaattcgaaaaggccgcccaggtgcgcgaccagctcgcgttgttg
cgcgagcgcgtgttcggtgcgaatgtcggcgaccatctgaccggcacggattga

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