Trinickia violacea: FAZ95_08320
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Entry
FAZ95_08320 CDS
T09503
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
tvl
Trinickia violacea
Pathway
tvl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FAZ95_08320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvl02000
]
FAZ95_08320
Transporters [BR:
tvl02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
FAZ95_08320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
QCP51700
UniProt:
A0A4V1EHW6
LinkDB
All DBs
Position
1:complement(1843660..1844700)
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AA seq
346 aa
AA seq
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MRRLFAKAGTAALIAAAMPAAGIALVAAPQPAHADETAICYNCPPEWADWASQIQAIQQK
TGVRVPFDNKNSGQAIAQLMAEQKSPVADVVYLGVSSAFQAKDKGVIQPYKPAHWSDIPA
NMKDPQGYWFAIHSGTLGFFVNKDALEGKPVPQSWADLLKPEYKGMIGYLDPSSAFVGYA
GAVAVNLALGGSMDNFEPGLNWFRQLKANAPIVPKQTAYARVLSGEIPILLDYDFDAYRA
KYKDHANVEFVIPKEGTISVPYVMSLVKGAPHEANGKKVLDFVLSDEGQKLWANAYLRPV
RANQMSADAASKFLPPSDYARAKPVDFAKMAEKQQAFGEQYLQIMH
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
ctgcgccgtctgtttgccaaggccggcaccgccgcgctaatcgccgcggccatgcccgcc
gccggcatcgcgctcgtcgccgccccgcagcccgcgcacgccgacgaaaccgcgatctgc
tacaactgcccgcccgaatgggccgactgggcgagccagattcaggcgatccagcagaag
accggcgtccgcgtcccgttcgacaacaagaactcgggccaggcgatcgcgcagctgatg
gcggagcaaaagagcccagtggcggacgtggtgtatctcggcgtgtcgtcggcgttccag
gcgaaggacaagggcgtgatccagccgtacaagcccgcgcactggagcgacatccccgcg
aacatgaaggacccgcaaggctactggttcgcgatccactcgggcacgctcggcttcttc
gtcaacaaggacgccctcgagggcaagcccgtgccgcaatcgtgggccgatctgctcaag
cccgagtacaaggggatgatcggctatctcgatccgtcgagcgcattcgtcggctacgcg
ggcgcggtggcggtgaacctcgcgctcggcggctcgatggacaatttcgagccgggcctc
aactggtttcgtcagctgaaagcgaacgcgccgatcgtgccgaagcagaccgcctacgcg
cgcgtgctgtccggtgaaattccgatcctgctggactacgatttcgatgcgtaccgcgcg
aaatacaaggatcacgcgaacgtcgaattcgtgatcccgaaggaaggcacgatctcggtg
ccgtacgtgatgagtctcgtgaagggcgcaccgcacgaagcgaatggcaagaaggtgctc
gacttcgtgctctccgacgaggggcagaagctgtgggcgaatgcgtatctgcggcccgtg
cgcgcgaaccagatgagcgccgacgccgcgtcgaagttcctcccgccgagcgactacgcg
cgagccaagcccgtcgacttcgcgaagatggccgagaagcagcaggcattcggcgaacag
tatctgcaaatcatgcattga
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