Trinickia violacea: FAZ95_08755
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Entry
FAZ95_08755 CDS
T09503
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
tvl
Trinickia violacea
Pathway
tvl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FAZ95_08755 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvl03400
]
FAZ95_08755 (mutS)
DNA repair and recombination proteins [BR:
tvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FAZ95_08755 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
DUF5817_CT
Motif
Other DBs
NCBI-ProteinID:
QCP49260
UniProt:
A0A4V1EH72
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Position
1:complement(1941812..1944493)
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AA seq
893 aa
AA seq
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MGNPIEAAGAASAASDVAQHTPMMQQYLRIKAEHPGTLVFYRMGDFYELFFDDAEKAARL
LDLTLTQRGASAGNPIKMAGVPHHAVEQYLAKLVKLGESVAICEQIGDPATSKGPVERKV
VRVVTPGTLTDAALLSDKSDVYLLALSPGHNKRGVVTNVGLAWLNLASGGLRLAEVAPDQ
VGAALERIRPAEILVADSPASSTPAGLAGALTRVPVWHFDVASGTQRLCDQLDVAGLDGF
GAQTLTSACGAAGALLLYASATQGQQLRHVRSLKVEYESEYIGLDPATRRNLELTETLRG
TESPTLYSLLDTCSTAMGSRLLRHWLHHPPRDALVAQTRQQAIGALLDAPVDASLDALRS
ALRQIADVERITGRLALLSARPRDLSSLRDTFASLPALRAKLAGIVANAAALARIDAELE
PPAGCVELLTRAVAAEPAAMVRDGGVIARGYDADLDELRDISENCGQFLIDLETRERTRT
GIANLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQE
RALARERALFDALLQSLLPFIADCQRVAAALAELDLLAALAERARALDWVAPEFSADIGI
DIEQGRHPVVEAQVEQFIANDCRLFADRKLLLITGPNMGGKSTFMRQTALIALLAYAGSY
VPARRARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRGT
STFDGLALAWAIARHLLSHNACYTLFATHYFELTQLPAEFAHAANVHLSAVEHGHGIVFL
HAVNEGPASQSYGLQVAQLAGVPPPVIRAARKHLAYLEQQSIGHATPQLDLFAEPVYLED
APDDAEDDAPAAQTHPALEKLRSIDPNDLKPRDALDLLYELHDLASAARDAQR
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatccaattgaagcggcgggcgctgcaagcgccgccagcgacgtcgcgcagcac
acgccgatgatgcagcagtatctccgcattaaagcggagcatcccggcacgctcgtcttt
tatcggatgggcgacttctacgagctcttcttcgacgatgccgaaaaagccgctcgtctg
ctcgacctgacactcacgcagcgcggcgcgtccgcgggcaacccgatcaagatggcgggc
gtgccgcatcacgccgtcgagcaatacctcgcgaagctcgtgaagctcggcgaatcggtc
gcgatttgcgaacagatcggcgatccggcgacgtccaagggcccggtcgaacgcaaggtc
gtgcgcgtcgtcacaccgggcacgctgaccgacgcggcgttgctctccgacaagagcgac
gtctatctgctcgcgctctcgccgggccacaacaagcgcggcgtcgtgacgaacgtgggc
ctcgcgtggctcaacctcgcaagcggcgggctgcgccttgcggaagtcgcacccgatcaa
gtcggcgccgcgctcgaacgcattcgcccggccgaaatcctcgtggccgactcgcccgcg
agctccacgcctgcgggtctggccggtgcgctgacgcgggtgcccgtgtggcatttcgac
gttgcgtcgggtacgcagcgcctgtgcgaccaattggatgttgcaggtctcgacggtttc
ggcgcgcaaacgctgacgagcgcatgtggcgcggccggcgcactgctgctctacgcgtcg
gcgacgcagggacagcaattgcgccatgtgcgcagcctgaaggtcgagtacgagtcggaa
tacatcggcctcgatccggctacgcgccgcaatctcgaactgacggaaacgttgcgcggc
accgaatcgccgacgctctattcgctactcgatacctgcagtacggcgatgggcagccgc
ttgctgcgtcactggctgcatcatccgccgcgcgacgcgttggtcgcgcaaacgcgccag
caggcgatcggcgcgctgctcgacgcgcccgtcgacgcgagcctcgatgcgttgcgcagc
gcgctgcgtcagattgcggacgtcgagcggatcacggggcggcttgcgctgctgtcggcg
cgtccgcgtgacctttcgagcctgcgcgacacattcgcctccctgccggcgctgcgcgcg
aaactggcgggcatcgtcgcgaacgcggcggccctcgcgcgcatcgacgccgagctcgaa
ccgcctgccggctgcgtcgaattgctgactcgcgcagtcgccgccgaaccagcggccatg
gtccgcgacggcggcgtgatcgcccgcggctacgatgcggatctcgacgaattgcgcgat
atttcggagaactgcggacaattcctgatcgacctcgagacgcgcgaacgcacccgcacc
ggcattgcgaatctgcgcgtcgagtacaacaaggtccacgggttctacatcgaagtcacg
cgcggccaaaccgacaaggtgccggacgattaccgccgccgccagacgctcaagaacgcc
gagcgctatatcacgcccgagctgaagaccttcgaagacaaggcgctctccgcacaggaa
cgtgcgctcgcccgtgaacgcgcgctcttcgacgcgctgctgcagtcgctcttgccgttc
atcgcggattgccagcgcgtcgccgcggcgcttgccgagctcgacctgctcgccgcgctc
gccgagcgagcccgcgcgctcgattgggtcgcaccggagttctcggcggatatcggcatc
gatatcgagcaaggacgccatccggtcgtcgaggcccaagtcgagcagttcatcgcgaac
gactgccgcctcttcgccgatcgcaagctgttgctgatcaccggccccaacatgggcggt
aagtcgacgttcatgcgccagaccgcgttgatcgcactgttggcctatgccggcagctac
gtgcccgcccggcgcgcccgcttcggcccgatcgaccgcatcttcacgcgcatcggcgcc
gccgacgacttggccggcggccgctcgacgttcatggtcgaaatgacagaagccgcggcg
atcctgaacgatgcgacgccgcagagtctcgtgctgatggacgagatcggccgcggcacg
tcgacgttcgacggtctcgcactcgcgtgggctatcgcgcggcacctcctttcgcacaac
gcctgctacaccctctttgccacgcactacttcgaactgacgcagttgccggcggaattc
gcgcacgcggcaaatgttcacttgtccgccgtcgaacacgggcatgggatcgttttcctg
catgccgtcaacgaaggccctgcaagccagagctacggcttgcaggtcgcgcagctggcc
ggcgtaccgccgcccgtgattcgcgcggcgcgcaaacacctcgcgtacctggaacaacag
tcgatcgggcacgcgacgccgcagctcgacttgttcgccgaaccggtctacttggaagat
gcaccggacgatgccgaggatgatgcgcctgctgcgcagacgcaccccgcgctcgaaaag
ctgcggtcgatcgatccgaacgatctgaaaccgcgtgacgcgctcgatttgctatacgaa
ctgcacgatctcgcgagcgccgcgcgggatgcgcaacgctaa
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