Trinickia violacea: FAZ95_09060
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Entry
FAZ95_09060 CDS
T09503
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
tvl
Trinickia violacea
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvl03036
]
FAZ95_09060 (smc)
Chromosome and associated proteins [BR:
tvl03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
FAZ95_09060 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
SMC_hinge
CCDC39
AAA_23
AAA_15
AAA_29
ABC_tran
ANAPC5
DUF6993
Motif
Other DBs
NCBI-ProteinID:
QCP49311
UniProt:
A0A4P8IMV5
LinkDB
All DBs
Position
1:2004985..2008503
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AA seq
1172 aa
AA seq
DB search
MRLTSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES
MQDVIFNGSTARKPGSRASVELVFDNADGRAAGQWGQYAEIAVKRVLTRDGTSSYYINNL
PARRRDIQDIFLGTGLGPRAYAIIGQGMIARIIEAKPEELRVFLEEAAGVSKYKERRRET
ENRLHDTRENLTRVEDIVRELGTNLEKLEAQAIVATKFKELQADGEEKQRLLWLLRKNEA
AGEQEKQQRAISAAQIDLEAQTAKLREVEAQLETLRVAHYSASDAMQGAQGALYEANSEV
SRLEAEIKFIVESRNRVQAQIAALAAQREQWQMQAEKARGDIEDAEEQLAIAEEKAVQAE
EEAAAKHDAMPALESRWRDAQNQLNDERGGIAQTEQSLKLEAAHQRNADQQLQQLQQRHE
RLKAEAGGLDAPDEAQLEELRMQLAEHEEILNDAQARLADAQETLPRLDGERRAAQERVQ
AESAQIHQLEARLAALKQLQENVQTEGKIQPWLDKHELGALPRLWKKLHVEAGWETALES
VLRERLAALEVSNLDWVKAFASDAPPAKLAFYAPPAAGVPREAPATLRPLLSLARIDDAG
IRAVLNEWLGQAFIADDLAQALAMRSQLPDGAMFVVKAGHLVTRVGVQLYAADSEQAGML
ARQQEIENLTRQVRAQGLLADEARAAAIRAEAAHTQASQALADVRGEAERATQRVHALQM
DVLKLTQAHERYTQRSTQIREELEEIGAQIEEQRAQRAESEANFERFDGQLAELQARFED
NQLAFEALDEALTIARGQSRDFDRNATDARFAVRNMANRIDELKRSIQVAHEQSERVAAS
LEDARAELETINEQTAHTGLQDALEIRAVKEEALHAARLELDDLTAKLRQADEMRLTAER
SLQPLRDRINELQLKEQAARINGEQFIEQLTAAGVDEAELQAKLTPDMKPSYLQGEVTRI
NNAIAALGPVNMAALDELAAASERKTFLDAQSADLTSAIETLEDAIRKIDQETRTLLQGT
FDEVNRHFGELFPRLFGGGQAKLIMTGDEILDAGVQVMAQPPGKKNSTIHLLSGGEKALT
ATALVFAMFQLNPAPFCLLDEVDAPLDDANTERFANLVRAMSDKTQFLFISHNKIAMEMA
QQLIGVTMQEQGVSRIVAVDMETAAGFAQNTV
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctgacctcgatcaaactcgctggcttcaagtctttcgtcgatcccacgcatttc
caggtaccgggccagcttgtcggcgtggtcggtcccaatgggtgcggcaagtccaacatc
atcgacgcggtgcgctgggtgctcggcgaatcgcgcgcctccgagctgcgcggcgaatcg
atgcaggacgtgatcttcaacggctcgaccgcacgcaaaccgggtagccgcgcgagcgtc
gaactcgtgttcgacaacgccgacggccgcgccgcgggccagtggggccaatatgcggaa
atcgccgtcaagcgcgtgctgacgcgcgacggcacgtcgagctactacatcaacaacctg
ccggcgcgccgccgcgacatccaggacatcttcctcggcaccggcttgggtcctcgcgcc
tacgcgatcatcgggcagggcatgatcgcgcggatcatcgaggcgaagccggaagagttg
cgcgtgtttctcgaggaggctgcaggcgtctcgaagtacaaggagcgccgccgcgagacc
gagaaccgcctgcacgatacgcgcgagaacctgacgcgcgtcgaggacatcgttcgcgag
ctcggcacgaatctcgagaagctcgaagcgcaggcgatcgtcgcgaccaagttcaaggag
ctgcaagccgacggcgaggaaaagcagcgcctcttgtggctgttgcgcaaaaacgaagcg
gcgggcgagcaggagaagcagcagcgcgcgatcagcgccgcgcagatcgacctcgaagcg
cagaccgccaagctgcgcgaagtcgaggcgcaactggaaacgctgcgggtggcgcactac
tcggcgagcgacgccatgcagggcgcgcaaggcgcgctttacgaggcgaattccgaagtg
agccgcctcgaagccgagatcaagttcatcgtcgaatcgcgcaaccgcgtgcaggcgcag
atcgccgcgctggccgcgcagcgcgagcaatggcagatgcaggccgagaaggcgcgcggc
gacatcgaggacgccgaggaacagctcgcgatcgccgaagaaaaggcggtgcaggccgaa
gaggaagcggcggccaagcacgacgcgatgccggcgctcgaatcgcgttggcgcgacgcg
cagaaccagctcaatgacgagcgcggcgggatcgcccagaccgagcagtcgctcaagctc
gaagcggcgcatcaacgcaatgccgaccagcaactgcagcaattgcaacagcgtcatgaa
cggctgaaagcggaagcgggcgggctcgacgcgccggacgaagcgcagctcgaagagctg
cgcatgcagcttgccgagcacgaagaaatcctgaacgacgcgcaagcgcgcctcgccgat
gcgcaggaaacgctgccgcggctcgacggcgagcgccgcgcggcacaggagcgcgtgcag
gccgaaagcgcacagattcaccagctcgaagcgcgtcttgccgcactcaagcaactgcag
gaaaacgtgcagaccgaaggcaagatccagccgtggctcgacaagcacgagctcggtgcg
ttgccgcgtctgtggaagaaattgcacgtcgaagccggctgggaaacggcgctcgaatcc
gtgctgcgcgagcggcttgccgcgctcgaagtctccaacctcgattgggtgaaggcattc
gcgagcgatgcgccacccgccaagctcgccttctacgcgccgcccgcggccggcgtgccg
cgcgaagcgcccgcgacgctgcgtccgttgctgtcgctcgcgcgcatcgacgatgccggc
attcgcgccgttctgaacgaatggctcggtcaggcgttcatcgccgacgatctcgcgcag
gcgctcgcgatgcgctcgcaactgcccgacggcgccatgttcgtcgtgaaggcggggcat
ctcgtgacgcgcgtcggcgtgcagctttacgcggccgattccgagcaggccggcatgctg
gcacgccagcaggaaatcgaaaacttgacgcgccaagtgcgcgcgcagggcttgctcgcc
gatgaggcgagggccgccgcgatccgcgcggaagcggcgcatacgcaggcgtcgcaagcg
cttgccgatgtgcgtggcgaagccgagcgcgccacgcagcgcgtgcacgcgctgcagatg
gacgtgctcaagctcacgcaggcgcatgagcgttacacgcagcgcagcacgcagattcgc
gaggagctcgaggagatcggcgcacagatcgaagagcagcgcgctcagcgggccgaatcg
gaagcgaatttcgaacgcttcgacggccagctcgccgaattgcaagcgcgcttcgaagac
aatcaactggcgttcgaggcgctggacgaagcgctgacgatcgcacgcggccagtcgcgc
gatttcgaccgcaacgccaccgacgcgcgtttcgccgtgcgcaacatggcgaatcgcatc
gacgaattgaagcgcagcatccaggtcgcgcacgagcagagcgagcgcgtggccgcctcg
ctcgaagacgcgcgcgcggaactcgaaaccatcaacgagcaaaccgcgcacacgggtctg
caggacgcgctggaaatccgcgctgtgaaggaagaagcgctgcacgcagcccgcctcgaa
ctcgacgatttgacggcgaagctgcgccaggcggacgaaatgcgcctgaccgcggagcgc
tcgcttcagccgctgcgcgaccggatcaacgagctgcagctgaaggagcaggccgcacgc
atcaacggcgagcagttcatcgaacagctgacggcagccggcgtcgacgaggccgaattg
caggcgaagctcacgccggacatgaagccgtcatacctgcaaggcgaagtcacgcgcatc
aacaacgcgatcgccgcgctcgggccggtgaacatggcggcgctcgatgagctggctgcc
gcgagcgagcgcaagaccttcctcgatgcgcaatcggccgacctgacgagcgcgatcgaa
accctcgaagacgcgatccgcaagatcgaccaggaaacgcgcacgctcttgcaaggcacg
ttcgacgaagtgaaccgccatttcggcgagctgttcccgcgccttttcggcggcgggcag
gcgaagctcatcatgaccggcgacgagatcctcgacgcgggcgtgcaggtgatggcgcag
ccgccgggcaagaagaactcgacgattcacctgctgtcgggcggggaaaaggcgctgacc
gcgacagcgctcgtgttcgcgatgttccagctcaatccggcgccgttctgcttgctcgac
gaagtggacgcgccgctcgacgacgccaacaccgaacgtttcgcgaaccttgtgcgtgcg
atgtcggacaaaacacagttcctgttcatttcgcacaacaagatcgcgatggagatggcg
cagcagctgatcggtgtgacaatgcaggagcaaggtgtgtcccgaatcgtggccgtcgac
atggaaacggccgcgggttttgcacagaatacggtttga
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