Trinickia violacea: FAZ95_09085
Help
Entry
FAZ95_09085 CDS
T09503
Name
(GenBank) pseudouridine synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
tvl
Trinickia violacea
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tvl03009
]
FAZ95_09085
Enzymes [BR:
tvl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
FAZ95_09085
Ribosome biogenesis [BR:
tvl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FAZ95_09085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
NfeD
Motif
Other DBs
NCBI-ProteinID:
QCP49315
UniProt:
A0A4P8IP26
LinkDB
All DBs
Position
1:complement(2013723..2015414)
Genome browser
AA seq
563 aa
AA seq
DB search
MRVKLTAKHPRPAAPERAPVRSGSASARKPVRPARPAAAKTDRPAGPARAPASGPAGAGR
SAGDARPPQSPAKRAAPAGATKKDSSTVRSGKPARAGAETSKRAYTERPARRDAAPADAK
RPPAARGEWRRDGETRSDRRDERAPAKRPTRANGERERGYAASERPAGARRDTSERTRGG
YGEGRPSDKPRQGAAGRPAGDSPRGGLKVGSPVKRSFVERDDRASETSSKRPAGERNARR
DGTPSRERANRAGSDTREDTRPSARQYAGRPARADDAHGRKPASDARARKPAASPSPAAA
KRNESESHAEEAGMMRLSKRMSELGLCSRREADEWIEKGWVLVDGERIDTLGTKVHAGQH
IEIVANARAAQAKQVTILLHKPVGYVSGQAEDGYQPAITLITPANHWDGDRSNIPFSANH
LRQLAPAGRLDIDSTGLLVLTQDGRVAKNLIGIHSPIEKEYLVRVAYGERTTDIDQHFPA
ELLAKLRHGLSLDDVPLRPAKVSWQNGEQLRFVLREGKKRQIRRMCELVGLQVVGLKRIR
MGQIPLGQLPQGQWRYLMPDEEF
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcaaattgacagccaagcatccgcgaccggcagcgccggaacgcgcccccgtc
cgttccggcagcgcgtcggcacgcaaacccgtgcggcccgctcgcccggcggcggcgaag
accgatcggccggccggaccggcccgcgcgccggcttccggtcctgccggcgctggccgg
agcgccggcgacgcacgcccgccgcagtcgcccgccaagcgagccgcgccggccggagcc
acgaagaaagacagcagcacggtgcgctccggcaagcctgcccgtgctggcgctgagacc
agcaagcgcgcctatacggagcgcccggcgcgccgcgatgccgcgcccgccgatgccaaa
cgaccgccggctgcgcgcggagaatggaggcgcgacggcgaaacgcgcagcgatagacgc
gatgagcgtgcgcctgccaagcgcccgacgcgggcaaacggggaacgcgaacgcggctat
gcggcatccgaacgccccgccggagcccgccgcgatacgtccgaacggacgcgcggcggt
tacggcgagggccgcccgtccgataaaccccgccaaggcgccgccggccgcccggcaggc
gattcgccgcgcggcggcctcaaagtcggcagcccggtcaagcgctcattcgtcgagcgc
gacgatcgcgcgtccgaaacgtcgtccaagcggccggctggcgagcggaacgcgcgccgc
gacggcacaccatcgcgcgagcgcgcaaaccgcgccgggtcggacactcgcgaggacaca
cgcccaagcgctcgccaatacgccgggcgcccggcgcgcgcggacgatgcgcacggccgc
aaaccggcctcggacgcacgcgcccgcaaacccgctgccagccccagccccgctgcggcc
aaacggaacgaatcggaatcccatgcagaggaagccggcatgatgcgcctctcgaagcgc
atgtccgaactcggcctgtgctcgcgccgggaggcggacgaatggatcgaaaagggctgg
gtcctcgtggacggcgagcggatcgatacgctcggcaccaaggtccacgccggacagcac
attgagatcgtcgcgaatgcacgcgcggctcaggccaagcaggtgacgatcttgctgcac
aagccggtcggttacgtgtccggccaggccgaagacggctatcagccggccatcacgctg
atcacgccggccaaccattgggacggcgatcgctcgaacatcccattttccgcgaaccat
ctgcggcagcttgcgccggccggacgtctcgacatcgattcgaccggccttctggtgctg
acgcaggacggccgcgtcgcgaagaatctgatcggcatccactcgccgatcgaaaaggag
tacttggtgcgcgtggcctacggcgagcgcacgacggacatcgatcaacacttcccggcg
gaactgctggcgaagctgcggcatggtctgtcgctcgacgacgttccgctgcggcccgcc
aaggtcagttggcaaaacggcgagcagctgcgattcgtcctgcgcgaaggcaagaagcgt
cagatccgccgcatgtgcgaattggtcggcctgcaagtggtcggcttgaagcgtatccgg
atgggccagattccgctgggtcagttgccgcagggacagtggcgctatctgatgccggac
gaggagttttga
DBGET
integrated database retrieval system
