Trinickia violacea: FAZ95_09885
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Entry
FAZ95_09885 CDS
T09503
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
tvl
Trinickia violacea
Pathway
tvl03030
DNA replication
tvl03430
Mismatch repair
tvl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAZ95_09885
03430 Mismatch repair
FAZ95_09885
03440 Homologous recombination
FAZ95_09885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvl03032
]
FAZ95_09885
03400 DNA repair and recombination proteins [BR:
tvl03400
]
FAZ95_09885
Enzymes [BR:
tvl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAZ95_09885
DNA replication proteins [BR:
tvl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FAZ95_09885
DNA repair and recombination proteins [BR:
tvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FAZ95_09885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_5
AAA_30
AAA_18
TsaE
AAA_assoc_2
Mg_chelatase
AAA_2
DUF3646
AAA_24
AAA_28
Glyco_tranf_2_5
nSTAND3
PIF1
Motif
Other DBs
NCBI-ProteinID:
QCP49458
UniProt:
A0A4P8IKR5
LinkDB
All DBs
Position
1:2178562..2180853
Genome browser
AA seq
763 aa
AA seq
DB search
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGVTSTPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLERILGEEQVVFEPQALRLLARSAEGSMRDALSLTDQAIAYSANQVTEEAVRGM
LGALDQSYLIRLLDALVAGDGPQVLAVADEMSLRSLSFSNALQDLAGLLHRIAWAQFAPT
SVLDEWPEANDLRRFADALTPEHVQLFYQIATLGRSELGLAPDEFAGFTMTLLRMLAFEP
AAPGGGGAAPAPRAAAPAVGGGAGRRPSTAPTVAAQSAAPVERPVASPSAAEPSRDASPA
QASADQQAAAAPQAVELDRGAVKPEAASEIADVPPEETVRRVEPIAIPPAAVAAEPASPP
PPPDAAPRSRAGGASAALDVLRNAGMRVSADRGRAAAAATGAKPAPAVAPKASAPQVKVP
TPRAVTRDEPASPSASNAAPTPPWDDIPLDDYVPASAEDAYFAQPDDGFVPAFDSARDDM
RIEPKAPQATAPVDTRPLPPAIPLDAIGFDGDWPALAAGLPLKGISYQLAFNSELTALEG
ATLKLSVPVPQYAESSQVAKLKAALAEKLGKPVDVQVEVGPARRTAAALDAAARAERQRE
AEREIGADPFVQSLIREFGASIVPGSIRPITPDVSAGAGSAAR
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagttctcgcacgcaagtggcgaccgaaggatttcgcttcgctcgtcgga
caagaacacgtcgtgcgcgcgctcacgcacgcgcttgacggcgggcgtctgcaccacgcc
tatctgttcaccggaacccgcggcgtcggcaagacgacgctttcgcgcatcttcgccaaa
gcgctcaattgcgaaaccggcgtgacctcgacgccgtgcggcgtgtgccgcgcgtgccgc
gagatcgacgaagggcgctttgtcgactacgtcgagatggatgcggcaagcaaccgcggc
gtcgatgaaatggcggcgctgctcgagcgggcggtgtatgcgccggtcgatgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctgaccaaccacgcgttcaatgcgatgttg
aagacgctggaggagccgcccgcgcacgtcaaattcattctcgcgaccaccgacccgcaa
aaaattccggtcacggttctctcgcgctgcttgcagttcaatctgaagcagatgccggcc
gggcatatcgtgtcgcacctcgagcggatcctcggcgaagagcaggttgtgttcgagccg
caggcgctgcgtctgttggcgcgctcggccgagggcagcatgcgcgatgcgctatcgctg
acggatcaggcgatcgcctactcggcgaatcaggtcaccgaggaagcggtgcgcggcatg
ctcggcgcgctcgatcagagctatttgattcgtttgctcgatgcgctcgtcgccggcgac
ggtccgcaagtgctggcggtcgcggacgagatgtcgttgcgcagcttgtcgttttccaat
gcgctgcaggatctcgcgggcttgctgcatcggatcgcgtgggcgcagtttgcgccgacg
tcggtgctcgacgagtggcccgaggcgaacgacctgcgacgtttcgcggacgcgctgacg
cccgaacacgtgcagctcttctatcagatcgcgacgcttggccgtagcgagttgggtctc
gcgcccgacgaatttgcgggcttcacgatgacgctgctgcgcatgctggcgttcgagccg
gccgcaccgggcggtgggggcgccgcgcccgcgccgcgagcggcggcaccggctgtcggc
ggcggagcgggccgtcggccgtccaccgcgccgacggttgccgcgcagtcggctgcgcct
gtagagcggccagttgcttcgccgtcggccgcagagccttcgcgtgatgcgtcgccagcg
caagcgtcggcggatcagcaagctgccgccgcgccacaggctgttgaactcgatcgcggg
gccgtcaagcccgaggcggcttcagaaatagcggacgtgcctccagaggagaccgtcagg
cgcgtggagccgatcgcaatcccgccggcagctgtagcggcggagccggcatctccgcca
ccaccgccggacgccgcgccacgttctcgcgcgggtggcgcaagcgcggcgctcgatgtg
ctgcgtaacgccggcatgcgcgtgtcggcggatcgcggccgcgcagcggctgccgcaaca
ggtgcgaagcccgcgccggccgtcgcgcccaaagcgagtgcaccccaagtcaaggtgccc
acgccgcgtgccgtgacgcgagacgagccggcaagcccgtcggcttcgaatgccgcgccg
actcccccttgggacgacatcccgctcgacgactacgtcccggcatccgccgaagacgcg
tacttcgcgcagcccgacgacggttttgtccctgccttcgacagcgctcgtgacgacatg
cggatcgagccgaaagcccctcaagccacagcgccggtcgacacgcgtccgttgccgccg
gcgattccgctcgacgcgatcggtttcgacggcgactggccggcgctcgccgccggcctg
ccgctgaaagggatttcttatcagctcgcgttcaacagcgaactgacggcactggaaggg
gctaccttgaagctgagcgttcccgtgccgcaatacgcggaaagctcacaggtcgcgaag
ctcaaggccgcgctcgccgagaagctcggcaaaccggtcgacgtgcaagtcgaggtcggg
ccggcgcgccgcacggcggcggcgctcgatgccgccgcgcgcgccgagcgtcaacgcgaa
gccgaacgcgagatcggcgccgacccgttcgtgcaatcgctgatccgcgaattcggcgcg
agcatcgtgccggggtcgatccggccgattacgcccgatgtgtcggcgggcgccggcagc
gccgcgcgctga
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