Trinickia violacea: FAZ95_10160
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Entry
FAZ95_10160 CDS
T09503
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tvl
Trinickia violacea
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tvl03009
]
FAZ95_10160 (rimO)
Enzymes [BR:
tvl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FAZ95_10160 (rimO)
Ribosome biogenesis [BR:
tvl03009
]
Prokaryotic type
ribosomal protein modification factors
FAZ95_10160 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
Methyltransf_2
S1CSD-TOTE-1
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QCP49506
UniProt:
A0A4P8IMF1
LinkDB
All DBs
Position
1:2241541..2242932
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AA seq
463 aa
AA seq
DB search
MKNPSESKAKASQGPRIGMVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTC
GFIDEAVQESLDAIGEALTENGKVIVTGCLGAKKSASGSGLIEEVHPKVLAVTGPHAVGE
VMQAVHSHLPKPHDPFVDLVPPAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR
PVAEVMLEAENLFKSGVKELLVISQDTSAYGVDVKFRTGFWNGRPLKTRMTELVGALGEL
AAQYGAWVRLHYVYPYPHVDEIIPMMAEGPFKGHVLPYLDVPFQHAHPDVLKRMKRPANA
EKTLERVQAWREICPDLTIRSTFIAGFPGETEAQFETLLDFIREAELDRVGCFAYSPVEG
ASANELDGALPDEVREERRARFMEVAEEVSAKRMMRKVGKTLKVLVDEVNADGGIGRTAA
DAPEIDGVVYVAPAAKASKRYKVGDFVSVKITGADGHDLWGEV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaatccttcagaatcaaaagctaaggcgagccaaggtccgcgaatcggtatggtc
tccctcggctgcccgaaagccctcgtcgattccgagcagatcatcacgcaactgcgtgcc
gaaggctacgaaatctcgggcacctatgacggcgccgatctcgtcgtcgtcaacacctgc
ggcttcatcgacgaagcggtccaggaaagtctcgatgcgatcggcgaggcgctgaccgag
aacggtaaggtgatcgtcaccggctgcctcggcgcgaaaaagagcgcgagcggctcgggg
ctgatcgaagaagtgcatccgaaggtgctcgccgtgaccgggccgcacgcagtcggcgag
gtgatgcaggccgtgcacagccatctgcccaagccccacgatccgttcgtcgatctcgtg
ccgccggccggcatcaagctcacgccgcgccactacgcgtatctcaagatctccgaaggc
tgcaaccatcgctgcacgttctgcatcatcccgtcgatgcgcggcgatctcgtttcgcgt
ccggtcgcggaagtcatgctcgaggcggaaaacctgttcaagtccggcgtcaaggaactg
ctcgtgatctcgcaggatacgagcgcctatggcgtcgacgtcaaattccgcaccggcttc
tggaacggccgcccgctcaagacgcggatgaccgagctcgtgggcgcgctcggcgagctg
gcggcgcaatacggcgcgtgggtgcggctccactatgtgtatccgtatccgcacgtcgac
gaaatcattccgatgatggccgagggtccgttcaagggccatgtgctgccgtacctcgac
gtgccgttccagcacgcgcaccccgacgtgctcaagcgcatgaagcgcccggccaacgcc
gagaagacgctcgagcgcgtccaggcgtggcgcgagatttgtccggatctgacgatccgc
agcaccttcatcgcgggcttcccgggtgagacggaggcgcagttcgagacgctcctcgac
ttcatccgcgaggccgaactggatcgcgtcggttgctttgcgtattcgccggtcgaaggc
gcgagcgcgaacgagctcgacggcgcgctgcccgacgaagtccgcgaggagcgccgtgcg
cgcttcatggaagtcgccgaggaggtgtcggccaagcgcatgatgcgcaaggtcggcaag
acgctcaaggtgctcgtcgacgaagtgaatgccgacggcggcatcggccgtaccgcggcc
gatgcgccggagatcgacggtgtcgtctatgtggcgccggcggcgaaggcgtcgaagcgc
tacaaggtcggcgacttcgtttcggtgaagatcaccggcgccgacggccacgatctctgg
ggcgaggtctga
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