Trinickia violacea: FAZ95_10340
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Entry
FAZ95_10340 CDS
T09503
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02525
LacI family transcriptional regulator, kdg operon repressor
Organism
tvl
Trinickia violacea
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvl03000
]
FAZ95_10340
Transcription factors [BR:
tvl03000
]
Prokaryotic type
Helix-turn-helix
LacI family
FAZ95_10340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_31
HTH_IclR
HTH_3
HTH_26
TetR_N
CbiJ
Methyltransf_31
Motif
Other DBs
NCBI-ProteinID:
QCP49536
UniProt:
A0A4P8IMI3
LinkDB
All DBs
Position
1:2284035..2285132
Genome browser
AA seq
365 aa
AA seq
DB search
MSYVRTGAPRRATISDVAREAGTGKTSVSRYLNGETNVLSLDLRERIEAAIKRLDYQPNQ
MARGLKRGRNRLIGMLVADLTNPYTVEVLQGVEAACQALGYMPLICHAANEVEMERRYLQ
LLTTYRVEGVIVNALGVKDEMLKPLGEGGIPAVLVDRKVAGLDADIVGLDNAEAVRAGTQ
HLLERGFAEIHFVVQPFEQVSSRRVREAAFREAIDNALRAAVADGAGGGGAGQAPRLQGQ
TVVLDLADPEAVIRTHAALDLRIDAAIDGSGKRIALFAANAPVALSLALHLNSHYGSRWQ
DRVALMSVDDPEWAELTGITTIRQPTYAIGYRAIEFLHERIDGVVSPIREAMLPGDLIVR
GSTAR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgtgcgtacgggagcgccacgccgcgcgacgatcagcgatgtcgcgcgcgaa
gcgggcacgggcaagacgagtgtgtcgcgctatctgaacggcgagaccaatgtgctgtcg
ctcgatctgcgcgagcggatcgaagcggcgatcaagcggctcgactaccagccgaaccag
atggcgcgcggcttgaagcgcgggcgcaaccgcctgatcggcatgctcgtcgccgacctg
acgaacccctatacggtcgaagtgctgcaaggcgtcgaggccgcgtgccaggcgctcggc
tacatgccgctcatctgccacgcggcgaacgaagtcgaaatggagcggcgctacctgcag
ctgctgacgacgtatcgcgtcgaaggcgtgatcgtcaacgccttgggcgtgaaggacgag
atgctcaagccgctcggcgagggcggcattccggccgtgctcgtcgaccgcaaggtggcg
gggctcgatgccgatatcgtcgggctcgacaatgccgaagcggttcgggccggcacgcag
catctgctcgagcggggctttgccgagatccacttcgtggtgcagccgttcgagcaggtc
agttcgcggcgtgtgcgcgaagctgcgtttcgcgaggcgatcgacaatgcgctacgcgcg
gccgtggcggatggcgcgggtggtggtggtgctggtcaggcgccgcgcctgcaaggccaa
acggtcgtgctcgatctcgccgatcccgaggccgtgatccgcacgcacgccgcgctcgat
ctccgcatcgacgccgccatcgacggttcgggcaagcgcatcgcgctgttcgcggcgaac
gcgccggtcgccttgtcgctcgcgctgcatctgaattcgcactatggctcgcgctggcag
gaccgcgtcgcgctgatgtcggtcgacgatcctgaatgggccgaactgacgggcatcacg
acgatccgtcagccgacctatgcgatcggctaccgcgcgatcgaattcctgcacgagcgc
atcgatggcgtggtttcgcccatccgcgaagcgatgctgccgggcgatttgattgtccgg
ggctccacagcgcgatag
DBGET
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