Trinickia violacea: FAZ95_10955
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Entry
FAZ95_10955 CDS
T09503
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
tvl
Trinickia violacea
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvl03000
]
FAZ95_10955
Transcription factors [BR:
tvl03000
]
Prokaryotic type
Helix-turn-helix
LacI family
FAZ95_10955
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_3
HTH_10
HTH_Tnp_ISL3
HTH_AraC
HTH_38
HTH_24
HTH_23
TetR_N
Fn_bind
HTH_AsnC-type
P-II
Motif
Other DBs
NCBI-ProteinID:
QCP49644
UniProt:
A0A4P8IRP6
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All DBs
Position
1:complement(2411164..2412219)
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AA seq
351 aa
AA seq
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MDKKRDAAATIKDVAEHAGVSPMTVSNVLRGKGRVSEETRRRVLEVAEREGYRPNLAARA
LVERKAPTLALMLGCITNPFYPEFTLATNLAALRHGRYLLVCNTDHEQDGGTRFLEEVGG
SLADGVLVANHGDLAVEQLREVEVRGIPVVISIWELPDEPPGIPCVAFDSKAAGRIATAH
LIELGHRRIGAVIGSPKTGIHRGRYRGYRDALRGAGIRPSAADERFASDSYESGYDTTIE
LLKARPDLTALFVSNDLPALGALNAAADFGLDVPRDLSIVSITDIEPAQRSRPPLTTVAI
PTEEIASKSVELLLALMSGHSGGKSVVETSTPFLVKRGSTAPVNKRATSAA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaaacgggacgcagcggcgaccatcaaggacgttgcagaacacgcgggtgtt
tcacccatgacggtatcgaacgtgttgcgcggcaaggggcgcgtgagcgaggaaacgcgc
aggcgcgtgctcgaggttgccgaacgcgaggggtatcgccccaacctggccgcgcgggcg
ctcgtcgagcgcaaggcaccgacgctggcgctgatgctcggctgtatcaccaacccgttc
tacccggaattcacgctcgcgacgaatctcgcggcccttcggcacgggcgatacctgctg
gtctgcaacaccgaccatgagcaagacggcggcacgcggtttctggaggaagtcggcggg
tcgctcgcggatggcgtgctggtcgccaatcacggagacttggccgtcgagcagttgcgc
gaagtcgaagtgcgtggcatcccggtcgtcatcagcatctgggagcttcccgacgaaccg
ccgggtattccatgcgttgcattcgattcgaaggcggccgggcggatcgccaccgctcac
ctgatcgagctcggtcatcggcggatcggcgccgtcatcggcagccccaagacaggcatc
catcgcggccgttaccggggctatcgcgacgcgctgcgcggcgcgggcattcggcccagc
gcggccgatgagcggttcgcgagcgacagctacgagagcggttacgacaccacgatcgaa
ctgctgaaagcgcgccccgatctgacagcgttattcgtgtccaatgaccttcccgcatta
ggggcactcaatgcggcggccgacttcggcctggacgtgccgcgagatctgtcgatcgtg
agcatcacggatatcgagcctgcgcaacgctctcggccgccgcttaccaccgttgcgatc
cccactgaggagatcgcatccaagagcgtggagctgttgctcgcgttgatgtcgggacat
tccgggggtaagagcgtcgtcgagacgtccacgccctttctcgtcaagcgcggttccacc
gcgccagtgaacaagcgggccacaagcgctgcttga
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