Trinickia violacea: FAZ95_12130
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Entry
FAZ95_12130 CDS
T09503
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
tvl
Trinickia violacea
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvl03000
]
FAZ95_12130
Transcription factors [BR:
tvl03000
]
Prokaryotic type
Helix-turn-helix
Other families
FAZ95_12130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
HTH_8
PAS_4
HTH_30
HTH_23
AAA_5
HTH_28
AAA
HTH_29
HTH_Tnp_ISL3
HTH_50
AAA_2
HTH_22
HTH_7
NUMOD1
HTH_1
P22_Cro
AAA_22
HTH_17
AAA_7
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
QCP49855
UniProt:
A0A4P8IQF6
LinkDB
All DBs
Position
1:2678747..2680729
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AA seq
660 aa
AA seq
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MREPIHQNAASSRCPEAGWLVPSIQKAHERSQTFGLDTSMRPDYDVLSTADLALKLEQSR
VLCTHALPVMETLREQIVNTHSMIVLTNAAGLILHSIGDDDFLQRAEKVALRAGANWAEQ
QQGTNAIGTAIAELSPTVVHGEQHYLAANRFLTCSSVPILDPYGELIGVLDVTGDHRSYH
QHTMALAKMSVQMIENHLFSNAFRGTLQIAFHGRPEFLGTLMEGIAAFTCDGRFLSANRS
AQFQLGMPLAALRAHTLSSLFGLTSPQLIDRLRRNPERHLSLELSNGTVVCANIEFRRPA
LGEEAWPPVTRAEDIPAQRNDGAPPAPVAKAMSRLSYLDTGDPQVAAVIGKVRKVLGKDI
PILITGETGTGKELLAQAIHNDSPHRSGPFVAVNCASIPETLIESELFGYEEGAFTGAKR
KGAIGKLLQANGGTLFLDEIGDMPYPLQVRLLRVLQERQVNPLGSTKSIPIDVAIICATH
RDLRDMMSQNRFREDLYYRLNGLVVKLPPLRERTDLAAVVPKLLQSESAEHGAGQRLRVA
DDVMALFERCTWPGNFRQLGNLLRTAAAMVDSDGEILREHLPDDFFDDLREPGVAPIAVA
SLPSLQGTRLQDVAASAIASAIAQHGGNVSAAARALGVSRNTIYRKMQCTPREDTLQEGR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaacccatccatcaaaacgctgcctcatcgcgatgccccgaagccggctggctc
gtgccatcgattcaaaaggcgcacgagcgctcgcagaccttcgggctcgacacgtcgatg
cggccggattacgacgtgctttccaccgcggaccttgcactcaagctcgaacaaagccgc
gtgctgtgcacgcacgccctgcccgtcatggaaaccctccgcgagcagatcgtcaacacg
catagcatgatcgtgctgaccaacgccgcggggctgattctccattcgatcggcgatgac
gacttcctgcagcgggccgagaaagtcgcgttgcgtgccggtgcgaactgggcggaacag
cagcaagggacgaatgcgatcggcacggcgatcgccgagcttagcccgaccgtggtccat
ggcgagcagcactatctggccgcaaatcggtttctgacctgctccagtgttccgatcctc
gatccgtatggagaattgatcggggtgctggacgtgacgggcgaccatcgcagctaccat
cagcacacgatggcgctcgcgaaaatgtcggtgcagatgatcgagaatcatctgttttcc
aacgcgtttcgcggcaccctgcaaattgcctttcatggccggcctgaattcctcggcaca
ctgatggaagggatcgctgccttcacctgtgacggacgcttcctctcggcgaaccgcagc
gcccaatttcagttgggcatgccgctcgccgcattgcgcgctcacacgctgtcttcgctc
ttcggcctgaccagcccgcagttgatcgatcgtctgcggagaaaccccgagcggcacctt
tcgctggaattgagcaacggcaccgtggtctgcgcaaacatcgaattcaggcggcccgcg
ttgggcgaagaggcttggccgccggtgacgcgagccgaggacattccggcgcagcgcaac
gacggcgcgccgcctgcaccggttgcgaaagcgatgtcgagattgagctacctcgacacc
ggcgacccgcaagtcgcggccgtcatcggcaaggttcgcaaagtgctcggcaaggacatc
cccatcctcatcaccggcgaaaccggcaccggcaaagaattgctggcccaagccattcac
aacgattcaccgcaccggtcgggcccgttcgtcgcggtgaactgcgcatcgattccggag
acattgatcgaatcggaattgttcggttatgaggaaggcgcgtttaccggcgcgaagcgc
aagggcgccatcggcaagttgctgcaggcaaacggcgggacgctgtttctcgatgagatc
ggtgatatgccctacccgctgcaggttcggctgcttcgtgtcctgcaggaacgccaggtc
aacccgcttggatcgacgaaatcgattccgatcgacgtcgcgattatctgcgcaactcac
cgcgatctgcgtgacatgatgtcccagaaccgcttccgcgaagacttgtactaccggctg
aacggcctggtggtgaaattgccgccgctgcgcgagcggaccgatcttgcggcggtcgtc
ccgaagctgctgcaaagcgagtccgccgagcacggagccggccagcggttgcgcgtggcc
gacgacgtcatggcgctgttcgagcgatgcacatggccgggcaacttccgccagctcggc
aatctcttgcggaccgcagcggcgatggtcgactcggacggcgagatactgcgcgagcat
ttacccgacgatttcttcgacgatttgcgcgagccgggtgtcgcgcccatcgctgtggcc
tcgctgccgtcacttcaaggcacgcggctgcaggacgttgccgcctccgcgatcgcctct
gcgattgcgcaacacggcggcaatgtctcagcggcggcgcgcgcactgggcgtatcgcgc
aatacgatctaccgaaaaatgcagtgcacgcctcgcgaagacacgcttcaggagggacgc
tag
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