Trinickia violacea: FAZ95_12155
Help
Entry
FAZ95_12155 CDS
T09503
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
tvl
Trinickia violacea
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvl03000
]
FAZ95_12155
Transcription factors [BR:
tvl03000
]
Prokaryotic type
Helix-turn-helix
Other families
FAZ95_12155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
HTH_8
HTH_30
AAA_5
HTH_23
PAS_4
Mg_chelatase
HTH_29
HTH_28
AAA_16
AAA
HTH_Tnp_ISL3
AAA_2
HTH_1
AAA_22
HTH_22
P22_Cro
HTH_50
NUMOD1
HTH_7
Parvo_NS1
HTH_17
AAA_7
Xre-like-HTH
HTH_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
QCP49859
UniProt:
A0A4P8IVG5
LinkDB
All DBs
Position
1:2687102..2689066
Genome browser
AA seq
654 aa
AA seq
DB search
MRDDPDRGDIEPACNEPGWLAPSIQRSHERSETYGLSTSMRPDYDVLSAADLALKREQSR
ILCAHAAPVMETLREQIANTQSMIVLTDAEGLILHSIGDAEFLKRAEKVALSPGANWAEA
RQGTNAIGTAIAELRPTVVHGDQHYLAANRFLTCSSVPIFDPYGELSGVLDVTGDHHSYH
QHTMALAKMSVQLIENHLFATTFRTTLQISFHERPEFLGTLMEGIAAFTSDGRFLSANRS
AQFQLGLTLAGLRAHTLSSLFGLTSAQLIDNVRASLGRHLSLSLRNGHSVCANVAFRHPP
SMISDSSVTQPGTTVARPRPICEERAARPRLGHLETGDPQVAAVIAKVRKVIGKDIPLLI
TGETGTGKERLAQAIHNDSPRHAAPFVAVNCASIPESLIESELFGYEEGAFTGAKRKGAI
GKILQAHGGTLFLDEIGDMPSPLQVRLLRVLQERVVNPLGSAKSIPVDVAIICATHRDLR
DMIAQGSFREDLYYRLNGLVVKLPPLRDRTDLRTVVETLLREESLSRPSTPALSVSSDVM
ALFERCRWPGNFRQLGNLMRTAAAMVDEDGEIRIEHLPDDFLEDVQAAAPAAGPNSTPLP
GARLQEVAALAIAAAVAKHGGNVSAAARALGVSRNTIYRKMLSAPDSDASDGDA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacgaccccgatcgcggcgacatcgaaccggcttgcaacgagccggggtggctc
gcgccatcgatacagcgatctcatgagcgctcggaaacctacgggctgagcacgtcgatg
cgcccggactacgacgttctttccgcagccgatctcgcattgaagcgcgaacagagccgc
atcctgtgcgcacacgcggcccccgtcatggagacgctccgcgagcagattgccaacacc
caaagcatgatcgtgttgacggatgccgagggcctcatcctgcattcgatcggcgatgcc
gagtttctcaagcgcgccgaaaaagttgcgttaagcccgggcgcgaactgggccgaagct
cgccagggcaccaatgcgatcggcaccgccatcgccgaacttcgtcccacggtggttcac
ggcgatcagcactatctcgccgcaaaccggtttctcacctgctccagcgtgccgatattc
gatccgtacggcgagttgagcggcgtgctcgacgtcaccggcgatcatcacagctaccac
cagcacaccatggcgctcgcaaagatgtctgttcaactcatcgaaaaccatctgtttgcg
acgacttttcggaccaccttgcaaatctcgtttcatgaacgcccagagtttctcggcacg
ctgatggaagggatagcggcattcacctccgacgggcgcttcctgtcggcgaatcgcagc
gcccaatttcagctcggcctgacgctcgcggggctgcgtgcgcatacgctctcgtcgctg
ttcggtctcacgagcgcccaattgatcgataacgtgcgcgcgagcttggggcggcatctt
tcgctttcgctgcgaaacggccatagcgtctgcgccaacgtggcgttcaggcatcccccg
tccatgatcagcgatagttccgttacgcagccgggcacaacagtggcaaggccccggcca
atctgcgaggaacgcgcggcacggccccgtctcggccatctcgagaccggcgatccgcaa
gtcgcagcggtcatcgccaaagtccgcaaagtcatcggcaaggacatcccccttctcatt
accggcgaaaccggtaccggcaaggaacgcctcgctcaagcgatccacaacgactcgccg
cgccacgccgcgccattcgttgcggtcaactgtgcgtcgatacccgagagcctcatcgag
tccgagctgttcggctatgaagaaggcgcatttaccggcgccaagcgcaaaggggcaatc
ggcaagattctgcaggcccatggcggcacgctctttctcgacgagatcggcgatatgccg
tctccgctccaggttcggctgctgcgcgtgctgcaggagagggtcgtgaatccgctcgga
tcggcgaagtcgattcccgtggacgtcgcgatcatctgcgccacccaccgggacttgcgc
gacatgatcgcgcaaggaagcttccgcgaagacctctactaccgcctgaacggactggtc
gtgaaactgccgcccttgcgcgacagaaccgaccttcgaacagtcgtcgagacactgctg
agagaggagtcgctcagccgaccaagcacccctgcgctctccgtatcgagcgacgtgatg
gccctcttcgaacgatgccggtggcccggcaactttcggcagctcggcaatctcatgcgc
accgctgcggcaatggtcgacgaagacggcgaaattcgcatcgagcatctgcccgacgac
tttctcgaggacgtgcaggcggcggcacccgccgccggccccaattcgacgccgctaccc
ggcgcgcggctgcaggaggttgccgcgctcgcgatcgccgcagcggtggccaagcacggt
ggcaacgtgtctgccgcggcgcgggcactgggggtctctcgcaacacgatctatcgaaag
atgctgtcggcgccggattcggacgccagcgatggcgacgcgtga
DBGET
integrated database retrieval system
