Trinickia violacea: FAZ95_12500
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Entry
FAZ95_12500 CDS
T09503
Name
(GenBank) cyclic nucleotide-binding domain-containing protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
tvl
Trinickia violacea
Pathway
tvl02010
ABC transporters
tvl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FAZ95_12500
03070 Bacterial secretion system
FAZ95_12500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvl02000
]
FAZ95_12500
02044 Secretion system [BR:
tvl02044
]
FAZ95_12500
Transporters [BR:
tvl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
FAZ95_12500
Secretion system [BR:
tvl02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
FAZ95_12500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
cNMP_binding
Peptidase_C39
ABC_tran
AAA_22
SMC_N
nSTAND3
AAA_25
AAA_29
AAA_15
NB-ARC
MobB
Guanylate_cyc_2
DUF87
NACHT
AAA_16
AAA_18
RsgA_GTPase
TsaE
Zeta_toxin
AAA_33
AAA_24
Motif
Other DBs
NCBI-ProteinID:
QCP49923
UniProt:
A0A4P8IRV4
LinkDB
All DBs
Position
1:complement(2760881..2763973)
Genome browser
AA seq
1030 aa
AA seq
DB search
MDAQAPAPSAASTAGSTAQSLADFLSSVELLSPFSREELERLASEMQTRTFAFGDTICLR
GESADGLFIVRTGSVRLFTEEHGKETSLGVRKAGEVFAEIAVLREYWHEASVRASSKVEL
LFIARSAFAPLIAENPAALSFVTSYVAISSAGGFVARLFDLRGKLNKSELEEYVSSVGVK
RVAAGKEIIKQGSREDLRLYVVRQGEVRIVRSEDGVDYPLATLGAGEIFGERACVLRQEQ
QASVTASADTRLLVIPEKTVHFILERNPKLREVLEERIRFVDRELQRQKKLAARRKRPAI
LDLATEPEFGEKVIKRFALVEQAEEMDCGAACLAMVCRHYGIPMTLGKLRELANVTTQGA
TLESLARTGESLGFTTRGVQCTFDAMLGFELPFIAHWEGYHYIIVYGMSKRWVRVADPAL
GFRKLSVEEFERGWGGTCLLFTASETTTEQAASRSPWVRFIGYLAPYKKILAHLFLATFV
IQLLGVVPPLIIQNILDGVVVHQNVGLLNLLILGLVISNLFTQLMITIRAHLSNFMVRNL
DFSMMSQFFKHTMSLPFSFFAKRKTGDVFARFQENQTIRAFLTESTVTTALNLLMIFIYF
TIMFLYNVKMTLLLIAFVIPIMALTALATPRIKRYAREVFSASTEAKSLLMETLGGIETV
KGMGIERPVRLKWERKYAKALEIQYRAQAFNILVGLGSQLLNAATTIVILWVGASLVLAQ
EMSIGQLIAFNAFMGSVLAPLMGLVGLWSLMNDAAVAMERLGDVLDIEPEQKPSDFASRV
LLPDLQGDISLDGVYFRYGGGETPYVLENISLDIKQGEMIAIVGRSGSGKTTLAKLLVGF
YTPTEGKIVVDGYDLNVIDQAFYRAQIGYVMQTNLVFSGTIAENIACGDASPDRRRIEEV
AKMADAHAFIAKMPLGYEQVVGERGMGLSGGQIQRLCIARALYHDPRLLVFDEATSSLDT
QSESNILANMQDILKGRTAVIIAHRLSTIMRADKILVLYEGAIAEQGRHDELVARQGMYY
QLVQKQLSAA
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggacgcacaagcaccggccccgagcgcagcctcgactgccggctcaaccgctcaatcg
ctggcggacttcctctcgtcggtcgagctgctgtcgccgttttcgcgcgaagagctcgag
cgtctcgcgagcgagatgcaaacgcgcacgttcgcgttcggcgacacgatctgtcttcgc
ggcgaaagcgcggacgggctcttcatcgtccgcacggggtcggtgcgtctcttcaccgag
gagcatggcaaggagacgagcctaggagtgcgcaaagcgggcgaggtgttcgccgagatc
gctgtattgcgcgagtattggcacgaagcgtcggtgcgggcgtcgtcgaaggtcgaactg
ctgttcatcgcacgtagcgcgttcgcgccactgatcgcagagaatccggcggcgctttcg
ttcgtgaccagctatgtcgcgatcagctcggcgggaggcttcgtcgctcggctcttcgat
ctgcgcggcaagctcaacaagagcgaactcgaagagtatgtgtcgagcgtcggcgtgaag
cgcgtcgcggccggcaaggaaatcatcaagcagggctcgcgcgaagacctgcgcctgtac
gtcgtgcgccaaggcgaagtgcgcatcgtgcgcagcgaggacggcgtcgactatccgctc
gccacgctcggcgcaggggagattttcggcgagcgggcctgcgtgctgcgccaggagcag
caggcgagcgtgaccgccagcgccgatacgcggctcctcgtgattcccgagaagacggtt
cacttcatcctcgagcgcaacccgaagctgcgcgaggtgctcgaggagcgcatccgtttc
gtggatcgcgaactgcagcggcagaaaaagctcgcggcacgccgcaagcgcccggcgatt
ctcgatctcgcgacggagcctgaattcggcgagaaagtcatcaagcgcttcgcgctcgtc
gagcaggccgaggagatggattgcggcgccgcgtgcctcgcgatggtctgccgtcactac
ggcataccgatgacgctcggcaagctgcgcgagctcgccaacgtgacgacgcaaggcgcg
acgctcgaaagcctcgcgcgcacgggcgaatcgctcggcttcacgacacgcggggtgcaa
tgcacattcgatgcgatgctcggcttcgagctgccgtttatcgcgcactgggagggctac
cactacatcatcgtctacggcatgagcaaacgctgggtgcgggtggcggacccggcgctc
ggtttccgcaagctctccgtcgaggaattcgagcgcggctggggcggcacctgcctgcta
tttaccgcgagcgagacgacgactgagcaagccgcgtcgcgctcgccgtgggtgcgcttc
atcggctacctcgcgccgtacaagaagatcctcgcgcaccttttcctcgcgacgttcgtg
attcagctgctcggcgtggtgccgccgctcatcattcagaacatcctcgacggtgtcgtg
gtccaccagaacgtgggcctgttgaatctgctcatcctcggcctcgtgatttcgaatctg
ttcacgcagctcatgatcacgattcgcgcgcatctgtcgaacttcatggtgcgcaatctc
gacttctcgatgatgtcgcagttcttcaagcacacgatgtcgctgccgttctcgttcttt
gccaagcgcaagaccggcgacgtgttcgcgcgcttccaggagaaccagaccatccgcgcg
ttcctgaccgaatcgaccgtcaccacggcgctcaatctgctgatgatcttcatctacttc
acgatcatgtttctctacaacgtgaagatgacgctgctcctgatcgccttcgtgattccg
atcatggcgctcaccgcgctcgcgacgcctcgcatcaagcgctatgcgcgcgaggtgttc
tcggcgtcgaccgaggcgaagtcgctgctgatggaaacgctgggcggcatcgagacggtg
aagggcatggggatcgagcggccggtgcggctcaagtgggagcgcaaatacgcgaaggcg
ctggaaatccagtatcgcgcacaggccttcaacatcctcgtcgggctcggcagtcaattg
ctgaacgcggcgacgaccatcgtgatcctgtgggtcggcgccagtctcgtgctcgcgcag
gaaatgtccatcggccagctcattgcgttcaacgcgttcatgggcagcgtgctcgcaccg
ctgatggggctcgtcggcctgtggagcctgatgaacgacgcagcggtggcgatggagcgc
ctcggcgacgtgctcgatatcgagccggaacagaagccgtcggacttcgcctcgcgcgtg
ctgctgccggatctgcagggcgacatcagtctcgatggcgtgtattttcgctatggcggc
ggcgaaacgccctatgtgctcgaaaacatcagcctcgatatcaagcagggcgagatgatc
gcgatcgtcggccgcagcggttccggcaagacgacgcttgcgaaactgctggtcggcttc
tatacgccgaccgagggcaagatcgtcgtcgacggctacgacctgaacgtgatcgatcag
gcgttctatcgcgcgcaaatcggctacgtgatgcagacgaacctcgtgttctccggaacg
atcgctgaaaacatcgcgtgcggcgatgccagcccggaccgccggcgcatcgaggaggtc
gcgaagatggccgacgcccatgcgttcatcgcgaagatgccgctcggctacgagcaagtc
gtcggcgagcgcggcatggggctctcgggcgggcagattcagcgcctgtgcattgcgcgc
gcgctgtatcacgacccgcggctgctcgtgttcgacgaggcgacgtcgtcgctcgatacg
caatcggagagcaacatcctcgcgaacatgcaggacattctcaagggacgcacggcggtc
atcattgcgcaccggctctccacgatcatgcgtgcggacaagatcctcgtcctgtacgaa
ggcgcgatcgccgaacaaggccggcacgatgaactcgtcgcgcgccagggcatgtattac
caattggtccagaagcaattgagcgccgcatga
DBGET
integrated database retrieval system
