KEGG   Trinickia violacea: FAZ95_12695
Entry
FAZ95_12695       CDS       T09503                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
tvl  Trinickia violacea
Pathway
tvl00010  Glycolysis / Gluconeogenesis
tvl00020  Citrate cycle (TCA cycle)
tvl00260  Glycine, serine and threonine metabolism
tvl00280  Valine, leucine and isoleucine degradation
tvl00310  Lysine degradation
tvl00380  Tryptophan metabolism
tvl00620  Pyruvate metabolism
tvl00630  Glyoxylate and dicarboxylate metabolism
tvl00640  Propanoate metabolism
tvl00670  One carbon pool by folate
tvl00785  Lipoic acid metabolism
tvl01100  Metabolic pathways
tvl01110  Biosynthesis of secondary metabolites
tvl01120  Microbial metabolism in diverse environments
tvl01200  Carbon metabolism
tvl01210  2-Oxocarboxylic acid metabolism
tvl01240  Biosynthesis of cofactors
Module
tvl_M00009  Citrate cycle (TCA cycle, Krebs cycle)
tvl_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
tvl_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
tvl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
tvl_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:tvl00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    FAZ95_12695 (lpdA)
   00020 Citrate cycle (TCA cycle)
    FAZ95_12695 (lpdA)
   00620 Pyruvate metabolism
    FAZ95_12695 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    FAZ95_12695 (lpdA)
   00640 Propanoate metabolism
    FAZ95_12695 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    FAZ95_12695 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    FAZ95_12695 (lpdA)
   00310 Lysine degradation
    FAZ95_12695 (lpdA)
   00380 Tryptophan metabolism
    FAZ95_12695 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    FAZ95_12695 (lpdA)
   00670 One carbon pool by folate
    FAZ95_12695 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tvl04147]
    FAZ95_12695 (lpdA)
Enzymes [BR:tvl01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     FAZ95_12695 (lpdA)
Exosome [BR:tvl04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   FAZ95_12695 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 HI0933_like AlaDh_PNT_C NAD_binding_8 FAD_oxidored FAD_binding_3 GIDA 3HCDH_N Thi4 DAO Lys_Orn_oxgnase Amino_oxidase Lycopene_cycl
Other DBs
NCBI-ProteinID: QCP49961
UniProt: A0A4P8IPD7
LinkDB
Position
1:complement(2803319..2804749)
AA seq 476 aa
MSKEFDVVVIGAGPGGYIAAIRAAQLGKTVACIEKWKNPAGALKLGGTCLNVGCIPSKAL
LASSEEFENASHHLVDHGINVSDVKLDISKMMSRKDGIVEKMTKGIEFLFRKNKITWLKG
HGKFTGKTDAGVTIEVSGEGETEVVTAKNVIIATGSKARHLPNAPVDNKIVSDNEGALAF
DSVPKKLAVIGAGVIGLELGSVWRRLGADVTVLEALPAFLGTCDEALAKEAAKQFKKQGL
DIHLGVNIGEVKTTADSVTMAYTDKDGNAQTLEADRLIVSIGRVPNTDNLGLEAIGLKAN
ERGFIDVDDHCRTAVPNVYAIGDVVRGPMLAHKAEDEGVLVAEVIDGQKPHIDYNCIPWV
IYTEPEIAWVGKTEQQLKAEGREIKTGQFPFMANGRALGINKADGFVKMIADAKTDELLG
VHIISADASDLIAEAVVAMEFKAASEDIGRICHPHPSLSEVMREAALAVDKRSLNM
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgtccaaagaatttgacgtcgtcgtgatcggcgccggcccgggcggatatatcgccgcc
atccgcgccgcgcagctcggcaagaccgtcgcatgtatcgaaaaatggaagaacccggcc
ggcgcgctcaagctcggcggcacgtgcctgaacgtgggctgcattccgtcgaaggcgctg
ctcgcgtcgtcggaggagttcgagaacgcgtcgcatcacctcgttgaccacggcatcaac
gtgtcggacgtgaagctcgacatctcgaagatgatgtcccgcaaggacggcatcgtcgag
aagatgacgaagggcatcgagttcctgttccgcaagaacaagatcacctggctcaagggt
cacggcaagttcaccggcaagaccgacgccggcgtgacgatcgaagtgagcggcgagggc
gagaccgaagtcgtcacggccaagaacgtgatcatcgcgacgggttcgaaggcgcgccac
ctgccgaacgcaccggtcgacaacaagatcgtgtcggacaacgaaggcgcactggcattc
gactccgtgccgaagaagctcgccgtgatcggcgcgggcgtgatcggcctggaactcggc
tcggtgtggcgccgtctcggcgccgacgtgaccgtgctcgaagcgctgccggcattcctc
ggcacctgtgacgaagcgctcgcgaaggaagcggcgaagcaattcaagaagcagggtctc
gacatccacctcggcgtgaacatcggcgaagtgaagacgaccgcagacagcgtgacgatg
gcctacaccgacaaggacggcaacgcgcagacgctcgaagccgatcgcctgatcgtgtcg
atcggccgcgtgccgaataccgacaacctcggtctcgaagcgatcggcctgaaggcgaac
gagcgcggcttcatcgacgtcgacgatcactgccgcacggcggtgccgaacgtctacgcg
atcggcgacgtggtgcgcggcccgatgctcgcgcacaaggccgaagacgaaggcgtgctg
gtcgccgaagtcatcgacggccagaaaccgcacatcgactacaactgcattccgtgggtg
atctacaccgagccggaaatcgcgtgggtcggcaagacggagcagcaactgaaggccgaa
ggccgcgagatcaagacgggacagttcccgttcatggcgaacggccgtgcgctcggcatc
aacaaggccgacggctttgtgaagatgatcgccgacgcgaaaaccgacgagctgctcggc
gtgcacatcatctcggcggacgcgtcggacctgatcgcggaagcggtggtggcgatggag
ttcaaggcggcgtcggaagacatcggccgtatctgccatccgcatccgtcgctttccgaa
gtgatgcgcgaagcggcgctcgccgtcgacaaacgctcgctcaatatgtaa

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