Trinickia violacea: FAZ95_13385
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Entry
FAZ95_13385 CDS
T09503
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tvl
Trinickia violacea
Pathway
tvl03420
Nucleotide excision repair
tvl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FAZ95_13385
03430 Mismatch repair
FAZ95_13385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvl03400
]
FAZ95_13385
Enzymes [BR:
tvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FAZ95_13385
DNA repair and recombination proteins [BR:
tvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FAZ95_13385
MMR (mismatch excision repair)
Other MMR factors
FAZ95_13385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QCP50083
UniProt:
A0A4P8IS87
LinkDB
All DBs
Position
1:complement(2964723..2967095)
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AA seq
790 aa
AA seq
DB search
MPELLANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGLASPATVLAVTF
TNKAAREMMARLSALLPIDTRGMWIGTFHGLCNRMLRAHHRDAGLPATFQILDTADQLSA
IKRLMKGLNVDDEKYPPKNLQYFINNAKEQGLRPEHVDASDSFNLKFVELYQAYEQQCQR
EGVVDFPELLLRCYELLAHNPPLRAHYQARFRHILVDEFQDTNKLQYAWLKMLAGDLNAN
PNAIFAVGDDDQSIYAFRGANVGNMRDFEHEFKVRHLIKLEQNYRSHGHILDAANQLIAN
NSRRLGKNLRTDAGHGEPVRVYEAATDSQEAGWIVEEIKALINTGLARGEVAVLYRSNAQ
SRTIEHTLVNAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPARGIG
ARSIEQLADAARLYNCSMAAAIPYVTGKAGSSLGAFANLVAKMRAETQQMSLPETVEYVV
RASGLADFYQNEREGQDRLENLQELVNAAAAFVSEEGYGLDTPARSIPLRPGATSAPEIA
AVPGDPSAVVLDPASITDPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAA
KGLEFTAVFITGLEEGLFPHENSALEQDGLEEERRLMYVAITRAKERLYLSFAQSRLLHG
QTRYNIRSRFFDELPQETLKWLTPKIEAGARWGGRSDNAGWGRDWFARPDRQESYAGAAV
DQAPLPAFANTQRAADTGFKVGQAVFHTKFGEGTVTALEGNGADARAQVRFKRHGEKWLA
LAVAKLQAVE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgcttgcgaatctgaatcccgaacaacatgccgccgtcacgctgccgaac
gaacccgcgctgatcctggccggggccggcagcggcaagacgcgcgtgctgatcacgcgc
atcgcgtggctgatccagcatgggctcgcgtcgcccgccaccgtgctcgccgtcaccttc
acgaacaaggccgcgcgcgagatgatggcgcgcctctcggcgctgctgccgatcgacacg
cgcggcatgtggatcggcaccttccacggcctatgcaaccggatgctgcgcgcgcatcac
cgcgacgcggggctgcccgccacgttccagattctcgataccgcggatcaactgtccgcg
atcaagcgtctgatgaagggcctgaacgtcgacgacgagaaatatccgccgaaaaacctc
cagtacttcatcaacaacgcgaaggaacaggggctgcggccggagcacgtcgatgcgtcc
gacagcttcaatctcaagttcgtcgagctctaccaggcgtacgagcagcagtgccagcgc
gaaggcgtcgtcgacttcccggagctgctgctgcgctgctacgagctgcttgcgcacaac
ccgccgctgcgcgcgcattatcaggcgcgcttccggcacatcctcgtcgacgagttccag
gacaccaacaagctccagtacgcgtggctcaagatgctcgcgggcgacttgaacgccaac
ccgaacgcgatcttcgcggtcggcgacgacgatcaatcgatctatgcgtttcgcggcgcg
aacgtcggcaacatgcgcgacttcgagcacgaattcaaggtgcggcacctgatcaagctc
gagcagaactaccgctcgcacggccatatcctcgacgcggccaaccagctcatcgccaac
aattcgcggcggctcggcaagaacctgcgcaccgacgcgggccacggcgagccggtgcgc
gtctacgaggcggccaccgattcgcaggaagccggctggatcgtcgaggagatcaaggcg
ctgatcaacacggggctcgcacgcggcgaggtcgcggtgctctatcgcagcaacgcgcag
tcgcgcacgatcgagcacacgctcgtcaatgcgggcatcgcgtaccgcgtgtacggcggc
ttgcgcttcttcgagcgccaggaagtgaagcacgcgctcgcgtatctgcgcctcatcgac
aacccgaacgacgacaccgcgttcgcgcgcgtcgtcaatttcccggcgcgcggcatcggc
gcgcgctcgatcgagcagctggcggacgcggcgcgtctctacaactgttcgatggcggcg
gcgattccttacgtgaccggcaaggccggctcgagcctcggcgcatttgcgaacctggtc
gcgaagatgcgcgccgagacgcagcagatgagcctgccggagacggtcgagtacgtggtg
cgcgcgagcggtctcgccgacttctatcagaacgagcgcgaaggccaggaccgcctcgag
aacttgcaggaactcgtgaacgcggccgcggcgttcgtcagcgaagagggctatgggctc
gacacgccggcgcgctcgatcccgctgcggcccggcgccacttcggcgcccgagatcgca
gcggtgccgggcgatccgtccgccgtggtgctcgatccggccagcatcacggaccccgcg
cagaaccccgacacgatgacgccgctcgcgggcttcctctcgcacgcctcgctcgaagcg
ggcgacaatcaggcgcaagcgggccaggacgccgtgcaattgatgacggtgcatgcggcg
aaggggctcgagttcacggcggtcttcattacggggctggaagagggactcttcccgcac
gagaacagcgcgctcgagcaagacgggctcgaggaggagcggcggctcatgtacgtcgcg
atcacgcgggcgaaagagcggctctatctgtcgtttgcgcagagccggctgctgcacggc
cagacgcgttacaacatccgctcgcgctttttcgacgagctgccgcaggagacgctcaag
tggctcacgcccaaaatcgaggcgggggcgcgctggggcggccgctcggacaacgcgggc
tggggccgcgactggttcgcgcgtcccgatcgccaggaaagctatgccggtgccgctgtc
gatcaggcgccgctacccgcgttcgccaatacgcagcgtgccgccgacacgggcttcaag
gtcggccaggcggtgtttcacacgaaattcggagagggcacggtgacggcgctcgaaggc
aacggcgccgacgcgcgcgcgcaagtcaggttcaagcggcacggcgagaagtggctcgcg
ctggctgtcgccaaattgcaggcggtcgaataa
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integrated database retrieval system
