Trinickia violacea: FAZ95_14160
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Entry
FAZ95_14160 CDS
T09503
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tvl
Trinickia violacea
Pathway
tvl03030
DNA replication
tvl03430
Mismatch repair
tvl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAZ95_14160 (dnaQ)
03430 Mismatch repair
FAZ95_14160 (dnaQ)
03440 Homologous recombination
FAZ95_14160 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvl03032
]
FAZ95_14160 (dnaQ)
03400 DNA repair and recombination proteins [BR:
tvl03400
]
FAZ95_14160 (dnaQ)
Enzymes [BR:
tvl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAZ95_14160 (dnaQ)
DNA replication proteins [BR:
tvl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FAZ95_14160 (dnaQ)
DNA repair and recombination proteins [BR:
tvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FAZ95_14160 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QCP50224
UniProt:
A0A4P8IT54
LinkDB
All DBs
Position
1:3106588..3107322
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AA seq
244 aa
AA seq
DB search
MRQIVLDTETTGLNARTGDRIIEIGGVELMNRRLTGNNLHFYINPERDSDPGALAVHGLT
TEFLSDKPKFAEIADQLRDFLGDAELIIHNAPFDLGFLDAEFALLGLPPFTESCGEVIDT
LVRAKSMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQESLVIDML
GEATAEGGEAGPRVAFESLALPVVAASEDELSAHQAVLDDLDKALKGTSVWRREPAPAEP
ADAT
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaaatcgttctcgacactgaaaccaccggcctcaatgcgcgcacgggcgaccgc
atcatcgaaatcggcggcgtcgaactcatgaaccgccggctgaccggcaacaacctgcac
ttctatatcaacccggaacgcgacagcgacccgggcgcgcttgccgtccacgggctgacg
accgaattcctgagcgacaagcccaagttcgccgagatcgccgatcaactgcgcgacttc
ctcggtgacgccgagctcattattcacaacgcgccattcgaccttggctttctcgatgcc
gaattcgcgctgctcggcctgccgccgttcactgagtcctgcggcgaggtgatcgatacg
ctcgtgcgcgcgaagtcgatgttcccgggcaagcgcaattcgctcgacgcgctgtgcgac
cgcttcggcatcagcaacgcgcaccgcacgctgcacggcgcactgctcgactccgagctg
ctcgcggaggtgtatctggcgatgacgcgcggccaggaaagcctcgtcatcgatatgctc
ggcgaggcgacggcggaaggcggcgaagctgggccgcgcgtcgcgttcgagtcgctcgcg
ctgccggtggtggcggccagcgaagacgagctgtcggcgcatcaggccgtgctcgacgat
ctcgacaaagcgctcaaggggacgagcgtctggcgtcgcgaacccgctccggcggagcca
gcggacgcgacttaa
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