Trinickia violacea: FAZ95_15285
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Entry
FAZ95_15285 CDS
T09503
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
tvl
Trinickia violacea
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvl03000
]
FAZ95_15285 (prpR)
Transcription factors [BR:
tvl03000
]
Prokaryotic type
Helix-turn-helix
Other families
FAZ95_15285 (prpR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
PAS_4
Mg_chelatase
PAS
AAA_22
AAA_7
AAA_2
PAS_8
PAS_7
AICE_RepA_C
AAA_16
HTH_psq
AAA
Diguanyl_cycl_sensor
DUF8471
AAA_3
HTH_23
TIP49
Motif
Other DBs
NCBI-ProteinID:
QCP50409
UniProt:
A0A4P8IX14
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All DBs
Position
1:complement(3341864..3343837)
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AA seq
657 aa
AA seq
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MNIPPSDSSSRPRIWAMGISRLGDLFLGIASEYEGRADVRVVSRGFEDAVHEIAAAGAER
PEVVVAGGANGAYLKTRVAVPVVLISPTGFDVMHALARARRDTTSVALVTHGDTPDEVRR
FAAAFGLDVVFASYQSAQDAEACVLDLRDRGIGAVVGPGLVADLAARAGMSAVFLYSRAS
VCAAFETALEVAQATRQEAVRRERLDNLLQHLRDGVVALDAHGRVEAINQRLAAVLDIDA
AKAIGQPLLELAPELAGVLPDADGDSPASVRGVSYVVHRGPLASSGTVLTFQESRAVERL
DRTLRSRQRAPQFTARYQLEDLFGECASVERVRTLVRRYAKSDATVLILGESGTGKEMVA
QSMHRLSVRRDFPFVAINCGAFPEALLESELFGYDEGAFTGARKGGKAGLIEAAHRGTLF
LDEIGEMPLPLQSRLLRVLQEREVVRLGATEPTRVDIRVLAATHRALTHAVEVGTFRADL
YYRLNILNIALPPLRERSTDLLPLAAELLWQAACRDPRLAEQVPDRDAAEHLLVSVEDAL
RRHTWPGNVRELQNVIERIAVELADRDVVHDALRKDRRFVPTQALTGDELQAIAPEIFDV
SSRGDDMPMTLRERSRHVEADEIRAVLAACNGDRDAACRKLGISKTTLWRRLNTSTA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcccccgtctgactcgagttcgcgcccccgcatctgggcgatgggcatcagt
cgcctgggtgatctctttctcggcatcgcgagcgagtatgaagggcgggctgacgtgcgt
gtcgtgtcacgcggctttgaggatgcagtacatgagattgccgccgcgggtgccgaacgt
ccggaggttgtcgtcgcaggaggggcgaacggggcgtatctgaagacccgcgtcgcggtc
cctgttgtgctgatcagtccgactggtttcgatgtgatgcatgcgcttgcacgggcgcgg
cgcgacacgacgtcggtggcgctcgtcacgcatggcgatacccccgacgaagtgcgtcga
ttcgctgcggcattcggcctggatgtcgtgttcgcttcgtatcagtcggcgcaggacgcc
gaggcttgcgtgcttgatctgcgcgatcggggcatcggtgcggtcgtcggtcccggcctc
gtagccgatctcgccgcccgggcggggatgagcgccgtatttctctattcgcgtgcgtca
gtgtgtgccgcgttcgagacggcgctggaggttgcacaggcaacccgccaggaggcggtg
cgccgcgagcggctcgataacctcctgcaacatctgcgcgacggcgtcgtcgcgcttgac
gcacacggtcgagtggaagcgatcaaccaacggcttgccgcagtgcttgatatcgacgct
gcaaaagctatcggccagccgctgcttgaactcgcccccgagcttgctggcgtattgccg
gacgcagacggtgattcgcccgcctcggtccggggcgtgagctacgtggtgcaccgcggg
ccgctcgccagcagcggcacggtgttgaccttccaggaatcgcgtgcggtcgagcgtctc
gaccgcacgctgcgctccagacaacgcgcgccgcagttcaccgcgcggtatcaactcgag
gatctgtttggagaatgtgcgtctgtggaacgcgtccgaacgttggtgcggcgctacgcg
aaatcggatgcaaccgtgctaattctcggtgaaagtggaaccggcaaggaaatggtcgcg
cagagcatgcataggctgagcgtacgccgagactttccgttcgtcgcgatcaattgcggc
gcttttcccgaggcgctgctcgagagcgagctgttcggctacgacgagggcgcattcacc
ggcgcgcgcaaaggcggcaaggcgggcctgatcgaagcggcgcatcgcggcacgctgttc
ctggacgagatcggcgagatgccattgccgctgcagagccgcctgctgcgcgtactacag
gaacgcgaagtggtgcggctcggtgcgactgagccgacacgtgtcgacatacgcgtgctc
gctgcaacgcaccgcgctctgacccatgcagtagaagtcggcacgttccgtgcggacctt
tattaccggttgaacatccttaacatcgcgctgcctccattgcgcgaacgttccactgat
ctgctgccgctcgctgccgaactgctgtggcaggcagcgtgccgcgatccgcgtcttgcg
gagcaggttcccgatcgcgacgcggccgagcacttactcgtgagcgtcgaggacgcgcta
cggcgccatacgtggccaggcaatgtgcgagaactgcaaaacgtgattgaacggatcgcg
gttgaactggccgatagagatgtcgtccacgacgcgctgcgcaaagaccgtcgatttgtg
ccgacgcaggcgctcacgggagacgaattgcaagcgatcgcgccggaaatctttgacgtg
tcttcgcgtggcgatgacatgccgatgaccttgcgcgaacgtagccgccacgtcgaggcg
gacgaaatccgtgcggtgctcgccgcatgcaacggcgatcgcgacgctgcgtgtcggaag
cttggcatcagcaaaacaacgttgtggcgcagattgaatacgtcgacggcgtga
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