Trinickia violacea: FAZ95_15670
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Entry
FAZ95_15670 CDS
T09503
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tvl
Trinickia violacea
Pathway
tvl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FAZ95_15670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvl03019
]
FAZ95_15670
03009 Ribosome biogenesis [BR:
tvl03009
]
FAZ95_15670
03036 Chromosome and associated proteins [BR:
tvl03036
]
FAZ95_15670
Enzymes [BR:
tvl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
FAZ95_15670
Messenger RNA biogenesis [BR:
tvl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FAZ95_15670
Ribosome biogenesis [BR:
tvl03009
]
Eukaryotic type
90S particles
RNase
FAZ95_15670
Prokaryotic type
rRNA processing factors
FAZ95_15670
Chromosome and associated proteins [BR:
tvl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
FAZ95_15670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
QCP50465
UniProt:
A0A4P8IRW0
LinkDB
All DBs
Position
1:complement(3429784..3431052)
Genome browser
AA seq
422 aa
AA seq
DB search
MPLSPLESRLRYEFRNAELLRQALTHRSHSATHNERLEFLGDSVLNCAVAALLFQRFGKL
DEGDLSRVRANLVKQQSLYEIAQALNISEGLRLGEGELRSGGFRRPSILADTLEAILGAI
FLDGGFEAAQTVIKRLYVPILDHIDPRTLGKDSKTLLQEYLQGHKIALPTYTVVATHGAA
HNQQFEVECTVPKLDIKVSGSGASRRAAEQAAAKKALDEVMAVAPALAAKPKRSKGARTA
KHAEPEIVPGVTGVQTALDLRAPEPRRDRAARAEAKAGHPESAAERAVPGPVAVIRASHV
EHSPDRVERAEKTEKGERTDKADRVEKPAAEKLAVEKVAANARPVAEKAGEKSVDKPMDT
LAADAAPKAQANGAGKAPEAAEPAARAAEKAAQPRETPVDDAASAAAVAAAVEPGAADAG
RS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcctctctccccgctggaaagccggttgcgctacgaatttcgcaatgcggaattgttg
cgccaagctttgacccatcgcagtcacagtgccacgcacaacgaacggctcgagtttctc
ggcgactccgttctcaactgcgcggtggctgccctattgttccaacggttcggcaaactg
gacgagggcgatttgtcccgcgtgcgggccaatctggtcaagcagcagtcgttgtatgaa
atcgctcaggccctgaatatttcagaaggcttgcgcctcggcgaaggcgagctgcgtagc
ggcgggttccggcgtccgtcgatcctcgccgatacgctcgaggcgatcctcggcgcgatc
tttctggatggcggcttcgaggccgcacagacggtcatcaagcgcctgtatgtcccgatt
ctcgaccatatcgatccgcgcacgctcggcaaggattccaagacgctgctccaggagtac
ttgcagggccacaagatcgcgctgccgacctatacggtcgtcgcgacgcatggtgcggcg
cacaatcaacagttcgaagtcgaatgcacggtgcccaagctcgatatcaaggtgtcgggg
tcgggcgcgagccgccgcgcggctgagcaggccgcggcgaagaaggcgctcgacgaggtg
atggccgtggccccggccttggccgccaagccgaagcgctcgaagggcgcgcgcaccgcc
aagcatgccgagccggaaatcgtgccgggcgtgaccggcgtgcagaccgcgctcgacttg
cgggcacctgagccgaggcgcgatcgggcggctcgtgcggaagcgaaggccggtcatccc
gagtcggccgccgagcgagccgtgcctgggccggtggcggtgatccgcgcgtcgcacgtc
gagcattcgccggatcgagtggaacgcgccgaaaagacggaaaagggggagcgaaccgat
aaggcggatcgcgtcgagaagcccgccgccgagaaactcgctgtggaaaaagtcgcggct
aacgctaggccggtggcagaaaaggccggcgaaaagagcgtcgacaagccgatggacacg
cttgccgccgacgcagccccgaaagcccaagccaacggagccggtaaagcccccgaagcg
gccgagcccgccgcgcgcgccgccgagaaggcagcgcagccgcgcgaaaccccggtggac
gatgccgcttcggccgcagccgtggcggcggccgtcgaacccggcgccgccgacgccggc
cgctcatga
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