KEGG   Trinickia violacea: FAZ95_15670
Entry
FAZ95_15670       CDS       T09503                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
tvl  Trinickia violacea
Pathway
tvl03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tvl00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    FAZ95_15670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tvl03019]
    FAZ95_15670
   03009 Ribosome biogenesis [BR:tvl03009]
    FAZ95_15670
   03036 Chromosome and associated proteins [BR:tvl03036]
    FAZ95_15670
Enzymes [BR:tvl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     FAZ95_15670
Messenger RNA biogenesis [BR:tvl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FAZ95_15670
Ribosome biogenesis [BR:tvl03009]
 Eukaryotic type
  90S particles
   RNase
    FAZ95_15670
 Prokaryotic type
  rRNA processing factors
   FAZ95_15670
Chromosome and associated proteins [BR:tvl03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     FAZ95_15670
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: QCP50465
UniProt: A0A4P8IRW0
LinkDB
Position
1:complement(3429784..3431052)
AA seq 422 aa
MPLSPLESRLRYEFRNAELLRQALTHRSHSATHNERLEFLGDSVLNCAVAALLFQRFGKL
DEGDLSRVRANLVKQQSLYEIAQALNISEGLRLGEGELRSGGFRRPSILADTLEAILGAI
FLDGGFEAAQTVIKRLYVPILDHIDPRTLGKDSKTLLQEYLQGHKIALPTYTVVATHGAA
HNQQFEVECTVPKLDIKVSGSGASRRAAEQAAAKKALDEVMAVAPALAAKPKRSKGARTA
KHAEPEIVPGVTGVQTALDLRAPEPRRDRAARAEAKAGHPESAAERAVPGPVAVIRASHV
EHSPDRVERAEKTEKGERTDKADRVEKPAAEKLAVEKVAANARPVAEKAGEKSVDKPMDT
LAADAAPKAQANGAGKAPEAAEPAARAAEKAAQPRETPVDDAASAAAVAAAVEPGAADAG
RS
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgcctctctccccgctggaaagccggttgcgctacgaatttcgcaatgcggaattgttg
cgccaagctttgacccatcgcagtcacagtgccacgcacaacgaacggctcgagtttctc
ggcgactccgttctcaactgcgcggtggctgccctattgttccaacggttcggcaaactg
gacgagggcgatttgtcccgcgtgcgggccaatctggtcaagcagcagtcgttgtatgaa
atcgctcaggccctgaatatttcagaaggcttgcgcctcggcgaaggcgagctgcgtagc
ggcgggttccggcgtccgtcgatcctcgccgatacgctcgaggcgatcctcggcgcgatc
tttctggatggcggcttcgaggccgcacagacggtcatcaagcgcctgtatgtcccgatt
ctcgaccatatcgatccgcgcacgctcggcaaggattccaagacgctgctccaggagtac
ttgcagggccacaagatcgcgctgccgacctatacggtcgtcgcgacgcatggtgcggcg
cacaatcaacagttcgaagtcgaatgcacggtgcccaagctcgatatcaaggtgtcgggg
tcgggcgcgagccgccgcgcggctgagcaggccgcggcgaagaaggcgctcgacgaggtg
atggccgtggccccggccttggccgccaagccgaagcgctcgaagggcgcgcgcaccgcc
aagcatgccgagccggaaatcgtgccgggcgtgaccggcgtgcagaccgcgctcgacttg
cgggcacctgagccgaggcgcgatcgggcggctcgtgcggaagcgaaggccggtcatccc
gagtcggccgccgagcgagccgtgcctgggccggtggcggtgatccgcgcgtcgcacgtc
gagcattcgccggatcgagtggaacgcgccgaaaagacggaaaagggggagcgaaccgat
aaggcggatcgcgtcgagaagcccgccgccgagaaactcgctgtggaaaaagtcgcggct
aacgctaggccggtggcagaaaaggccggcgaaaagagcgtcgacaagccgatggacacg
cttgccgccgacgcagccccgaaagcccaagccaacggagccggtaaagcccccgaagcg
gccgagcccgccgcgcgcgccgccgagaaggcagcgcagccgcgcgaaaccccggtggac
gatgccgcttcggccgcagccgtggcggcggccgtcgaacccggcgccgccgacgccggc
cgctcatga

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