Trinickia violacea: FAZ95_16535
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Entry
FAZ95_16535 CDS
T09503
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tvl
Trinickia violacea
Pathway
tvl03030
DNA replication
tvl03430
Mismatch repair
tvl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAZ95_16535
03430 Mismatch repair
FAZ95_16535
03440 Homologous recombination
FAZ95_16535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvl03032
]
FAZ95_16535
03400 DNA repair and recombination proteins [BR:
tvl03400
]
FAZ95_16535
Enzymes [BR:
tvl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAZ95_16535
DNA replication proteins [BR:
tvl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FAZ95_16535
DNA repair and recombination proteins [BR:
tvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FAZ95_16535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QCP50623
UniProt:
A0A4P8ITH5
LinkDB
All DBs
Position
1:complement(3614002..3615141)
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AA seq
379 aa
AA seq
DB search
MSDPYLPNPAIDTPIAFVDLETTGGSTAEHRITEIGVVEAGPLGVSRWSTLVDPQQPIPP
FIQQLTGITDDMVRGAPTFDEIAGELFARLEGKLFVAHNASFDRGFLRSEFRRIGLGFNP
DVLCTVRLSRALYPAEKRHGLDALVDRHALVPSARHRALADADLLWQFWQRLHGLVPVEV
LRDHIERTTRRFRLAGDITEDVLDSAPAGCGVYVFYGEADVPLYVGRSVRLRQRVRSHLS
GERRSAKETRLAQQIRRVEWRETGGELGALLAEAQWIAALRPLHNRLPRVSRSDPVDAPW
PFDGAIVFEEREDGSSRTSIHVVDRWRYLGCAASLAEAATLAVGSAASDFELSTYRILQT
HLARGLRVTALGDSVATAL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatccgtatctgccgaaccccgctatcgacactcccatcgcctttgtagactta
gaaaccacgggcggttcgactgcggagcaccggatcaccgagatcggcgtcgtcgaggcg
ggcccccttggcgtgtcccgctggagcacgttggtcgacccgcaacagccgattccacca
ttcattcagcaactcaccggcattaccgatgacatggtgcgcggcgcgcctacattcgac
gaaatcgcgggtgagctgtttgcgcggctcgaaggcaagctgttcgtcgcccacaacgcg
agcttcgatcgtggcttcttgcgcagcgagttccggcgcatcggactgggtttcaacccg
gacgttctttgcaccgtgcgcttgtcgcgggcgttgtaccccgccgagaagcgtcatggc
ctcgacgcgctcgtcgaccgtcacgcgctcgtgccgtccgccagacaccgcgcgctcgcc
gatgccgatctgctttggcagttctggcagcggctgcacggactcgttcccgtcgaggtg
ttgcgcgatcacatcgaacgcactacccgccgcttccggctcgcgggcgacatcacggaa
gacgtgctcgactcggcccctgcaggctgtggcgtctacgtgttctatggcgaagcggat
gtgccgctgtatgtcggccgcagcgtgcgtctgcgccagcgcgtgcgctcgcatctgtcc
ggagagcgccgttcggccaaggagacgcggctcgcacagcaaatccggcgcgtcgaatgg
cgtgagacaggaggggagctcggcgcgctgctcgccgaggcgcagtggatcgccgcgctg
cgtccgctgcataaccgtctgccgcgcgtgagccgcagcgaccccgtcgatgcgccgtgg
ccgttcgacggcgcgatcgttttcgaggagcgcgaggacggttcgtcacgcacctcgatt
catgtggtcgatcgttggcgttatctcggctgtgcggcgtcgctggcggaagcggcaacg
ctcgccgtgggcagcgcggccagcgatttcgaattgtcgacgtatcgaattctccagacg
cacctggcgcgtgggctgcgcgtcaccgcacttggcgacagcgttgctactgccctttaa
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