Trinickia violacea: FAZ95_17195
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Entry
FAZ95_17195 CDS
T09503
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
tvl
Trinickia violacea
Pathway
tvl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FAZ95_17195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvl02000
]
FAZ95_17195
Transporters [BR:
tvl02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
FAZ95_17195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
QCP50737
UniProt:
A0A4P8IRS1
LinkDB
All DBs
Position
1:complement(3747737..3748783)
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AA seq
348 aa
AA seq
DB search
MMKFGKSRCALAVGVALALGAAQAGAAELTVVNFGGANGDAQKAAFNQPFETQSGNKVTA
VEYNGEQAKVKAMVEAKHVNWDVVEVESGDLGRGCDEGLYEKLDWSKIAKKGELIPEAPQ
TCGAGIFVWSTVFAYNADKLKTAPTSWADFWNVSKFPGKRGMRKGARYNLEFALMADGVA
PKDVYKVLATKEGQDRAFKKLDELKPNIQWWEAGAQPPQFLVAGDVVMSTAYNGRIDAAQ
KEGKNLKVVWNGSIYDLDYWAIPKGTPNKDLAVKYIAYSLSSQPQQDYAKHIAYGPVNVA
AIKSLDAKTLSNLPNSPANGKNAVLQDLTFWNDHGDELEQRFASWAAK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagttcggaaaatcgcgctgtgcattggctgtcggcgtggcgctcgcactgggt
gccgcgcaggccggcgctgcggagctgaccgtcgtcaacttcggcggcgcgaacggcgat
gcgcagaaagccgcgttcaaccagccgttcgaaacgcagtccggcaacaaggtgacggcc
gtcgagtacaacggcgagcaggccaaggtcaaggcgatggtcgaagcgaagcacgtgaat
tgggacgtcgtcgaagtggagtcgggcgatctcggccgcggctgcgacgagggcctgtat
gagaagctcgactggtcgaagatcgcgaagaagggcgagctgattcccgaagcgccgcaa
acgtgcggtgcgggcatcttcgtgtggtcgaccgtgttcgcctacaacgccgacaagctg
aagaccgcgccgacgagctgggccgatttctggaacgtctccaagttcccgggcaagcgc
ggcatgcgcaagggcgcgcgctacaacctcgagttcgcgctgatggccgatggcgtcgca
ccgaaggatgtctacaaggtgctcgcgacgaaggaaggccaggatcgcgccttcaagaag
ctcgatgagctcaagccgaacatccaatggtgggaagccggcgcgcagccgccgcagttc
ctcgtggcgggcgacgtcgtgatgtcgacggcgtacaacggccgcatcgacgccgcgcag
aaggaaggcaagaacctgaaggtcgtctggaacggcagcatctacgacctcgactactgg
gcgattccgaagggcacgccgaacaaggatctggcggtcaagtacatcgcctactcgttg
tcgtcgcagccgcagcaggactacgcgaagcacatcgcgtacgggccggtgaatgtcgcc
gcgatcaagtcgctcgacgcgaagacgctctcgaacctgccgaattcgccggcgaacggc
aagaacgcggtgctgcaggacctgacgttctggaacgaccacggcgacgagctggagcag
cgcttcgcctcgtgggctgcgaagtaa
DBGET
integrated database retrieval system
