Trinickia violacea: FAZ95_17415
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Entry
FAZ95_17415 CDS
T09503
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
tvl
Trinickia violacea
Pathway
tvl00521
Streptomycin biosynthesis
tvl00523
Polyketide sugar unit biosynthesis
tvl00525
Acarbose and validamycin biosynthesis
tvl00541
Biosynthesis of various nucleotide sugars
tvl01100
Metabolic pathways
tvl01110
Biosynthesis of secondary metabolites
tvl01250
Biosynthesis of nucleotide sugars
Module
tvl_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FAZ95_17415 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FAZ95_17415 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FAZ95_17415 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FAZ95_17415 (rfbB)
00525 Acarbose and validamycin biosynthesis
FAZ95_17415 (rfbB)
Enzymes [BR:
tvl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FAZ95_17415 (rfbB)
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Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
QCP50778
UniProt:
A0A4P8IP16
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All DBs
Position
1:complement(3797880..3798941)
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AA seq
353 aa
AA seq
DB search
MILVTGGAGFIGANFVLDWLRASDEAVLNIDKLTYAGNLRTLKSLQGNAKHIFARADICD
RAALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWNTLSDA
GKAEFRFLHVSTDEVFGSLSATDPQFSEITPYAPNSPYSATKAGSDHLVRAYHHTYGLPT
LTTNCSNNYGPYQFPEKLIPLMIANALAGKALPVYGDGQNVRDWLYVGDHCSAIREVLAR
GKPGETYNVGGWNEKKNLEVVHTLCDLLDAARPKAQGSYRDQIAYVTDRPGHDRRYAIDA
RKLERELGWKPAETFETGLAKTVHWYLDNQEWADEVASGEYRKWVETNYAQRA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggtaacgggcggcgccggttttatcggcgccaactttgtgcttgattggctg
cgcgcttccgatgaagcagtcctgaacatcgacaaactcacgtacgcaggcaatttgcgt
acgctcaagtcgttgcagggcaacgcgaagcatatttttgcacgagccgatatctgcgat
cgggctgctctcgacgccctctttgccgaacacaagccgcgcgcggtactgcacttcgca
gcggagagccacgtcgaccgctccattcatggtccggcggactttgtccagactaacgtg
gttggcacgttcacgctgctggaagccgcgcgccagtattggaacaccctgagcgacgcc
ggcaaggccgagttccgcttcctgcacgtctccacggacgaagtgttcggctcgctgtcg
gcgacggacccgcaattctccgagatcacgccgtacgcgcccaatagcccgtactcggcg
accaaggcgggttccgaccatctcgtgcgcgcgtatcaccacacgtatggcttgccgacg
ctgacgacgaactgctcgaacaactatggcccgtaccaattcccggagaagctgattccg
ctgatgattgcaaacgccctggcgggcaaggcattgccggtgtacggcgacggccagaat
gtgcgcgactggctgtacgtcggcgaccattgcagtgcgatccgcgaagtgctggcgcgc
ggcaagccgggcgagacgtacaacgtcggcggttggaacgagaagaagaatctcgaagtc
gtgcacacgctgtgcgatctgctcgatgcggcgcgtccgaaggcgcagggctcgtatcgt
gaccagatcgcctatgtgacggatcgccccggccacgaccgccgctacgcgatcgacgcg
cgcaagctcgagcgcgagcttggctggaagccggccgagactttcgaaacgggtctggcg
aagacggtgcactggtatctggacaaccaggagtgggccgatgaggtggcttccggagaa
taccggaagtgggtggagaccaattacgcgcagcgcgcgtga
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