Trinickia violacea: FAZ95_18240
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Entry
FAZ95_18240 CDS
T09503
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tvl
Trinickia violacea
Pathway
tvl00260
Glycine, serine and threonine metabolism
tvl00460
Cyanoamino acid metabolism
tvl00630
Glyoxylate and dicarboxylate metabolism
tvl00670
One carbon pool by folate
tvl00680
Methane metabolism
tvl01100
Metabolic pathways
tvl01110
Biosynthesis of secondary metabolites
tvl01120
Microbial metabolism in diverse environments
tvl01200
Carbon metabolism
tvl01230
Biosynthesis of amino acids
tvl01240
Biosynthesis of cofactors
tvl04981
Folate transport and metabolism
Module
tvl_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FAZ95_18240
09102 Energy metabolism
00680 Methane metabolism
FAZ95_18240
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FAZ95_18240
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FAZ95_18240
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FAZ95_18240
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FAZ95_18240
Enzymes [BR:
tvl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FAZ95_18240
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
QCP50916
UniProt:
A0A4P8IRC7
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All DBs
Position
1:complement(3995719..3996966)
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AA seq
415 aa
AA seq
DB search
MFDRAQSTIANVDPEIWKAIQQENHRQEEHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRVKELFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNEAEDIDYDAAEKLAQEHKPKLIVGGASAFAL
RIDFERLAKIAKSVGAYLMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEYEKPINSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFKAYQQQVVDNARVLAETL
VKRGLRIVSGRTESHVMLVDLRAKHITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGI
RLGSPAMTTRGFGVKEAEQVGNLIADVLDNPEDAATIERVRGQVAELTKRFPVYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagagcccaaagcaccatcgccaacgtcgatccagaaatctggaaagcgatc
caacaggaaaaccaccgtcaggaagagcacatcgaactgatcgcgtcggaaaactacacg
agccccgccgtgatggccgctcagggctcgcagctcacgaacaagtacgccgaaggctac
ccgggcaagcgctattacggcggttgcgaatatgtcgacgtcgtcgagcagctcgcaatc
gaccgcgtgaaggagctcttcggcgcggaagccgccaacgtgcagccgaattcgggctcg
caggccaaccagggcgtgttcttcgcgatgttgaagccgggtgacacgatcatgggcatg
agcctcgcccacggcggccacctgacgcacggctcgcccgtaaacatgtcgggcaagtgg
ttcaacgtcgtcagctacggtctgaacgaagccgaagacatcgactacgacgccgccgaa
aagctcgcgcaggaacacaagccgaagctgatcgtcgggggcgcgtcggcattcgcgctg
cgcatcgatttcgagcgcctcgcgaagatcgcgaagtcggtcggcgcgtacctgatggtc
gacatggcgcactacgcgggcctgatcgccgcgggcgtctatccgaacccggtaccgcac
gccgatttcgtcacgacgaccacccataagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaagccgagtacgagaagccgatcaattcggcgatcttcccgggcatccagggc
ggtccgctcatgcacgtgatcgccgccaaggctgtcgcgttcaaggaagcactgtcgccg
gaattcaaggcgtaccagcagcaagtcgtcgacaacgcccgtgtgctggcggaaacgctc
gtgaagcgcggcctgcgcatcgtgtcgggccgcacggaaagccacgtgatgctcgtcgac
ctgcgcgcgaagcacatcacgggcaaggcggcggaagcggcactcggcgcggcgcacatc
accgtcaacaagaacgcgattccgaacgatccggaaaagccgttcgtcacgagcggcatt
cgcctcggctcgccggcgatgacgacgcgcggcttcggcgtgaaggaagccgagcaagtg
ggcaacctgatcgccgacgtgctcgacaacccggaagacgccgccacgatcgaacgtgtg
cgcgggcaagtcgccgagctgacgaagcgtttcccggtctaccgctga
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