Trinickia violacea: FAZ95_18330
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Entry
FAZ95_18330 CDS
T09503
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
tvl
Trinickia violacea
Pathway
tvl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FAZ95_18330 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvl02000
]
FAZ95_18330 (xylF)
Transporters [BR:
tvl02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
FAZ95_18330 (xylF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
BRCT
zf-C2H2-SPIN-DOC
Motif
Other DBs
NCBI-ProteinID:
QCP50931
UniProt:
A0A4P8IRV6
LinkDB
All DBs
Position
1:4014722..4015753
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AA seq
343 aa
AA seq
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MKTFTTRRSILSSLVCGAMLATLSLAAPLAHASKDHPEIGFCIDDLRVERWSRDRDYFVA
AAEKLGAKVSVQSADASEARQISQIENLISRGVDVIVIVPFNSKTLGNVIAEAKKAGIKV
ISYDRLILDADVDAYISFDNKKVGELQAQGVYNAQPKGNYFLLGGAPTDNNAKMLREGQM
EVLKPAIDRGDIKIVGQQWVPEWSASTALRIVEDALTANNNKIDAIVASNDGTAGGAIQA
LAAQHLAGKVPVSGQDADLAAVKRVVAGTQTMTVYKPLKLIAGEAANLAVQLAKGEKPAY
NAQYDNGKKKVDTVLLQPTLLTKSNVDIVVKDGFYTQAQLASQ
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaagacattcacaacgcgccgttcgatcctgagttcgctcgtctgcggggcgatgctc
gccacgctgtcgcttgccgcgccgctcgcgcatgcgagcaaggatcaccctgaaatcggc
ttctgcatcgacgacctgcgcgtcgaacgctggtcgcgcgaccgcgactacttcgtcgcc
gcggcggaaaaactcggcgcgaaggtctccgtgcaatcggcggacgccagcgaggcgcgc
cagatttcgcagatcgagaacctgatttcgcgcggcgtcgacgtgatcgtcatcgtgccg
ttcaactcgaagacgctcggcaacgtcatcgccgaagcgaagaaggccggcatcaaggtg
atttcctacgaccgcctgattctcgatgccgacgtcgacgcctatatctcgttcgacaac
aagaaggtcggcgagctgcaagcgcaaggcgtctataacgcgcagccgaagggcaactac
ttcctgctcggcggcgcgccgaccgacaacaacgcgaagatgctgcgcgaaggccagatg
gaagtgctcaagcccgcgatcgaccgcggcgacatcaagatcgtcggtcagcagtgggtg
ccggaatggagtgcatcgaccgcgctgcgcatcgtcgaagacgcgctgacggcgaacaac
aacaagatcgacgcgatcgtcgcctcgaacgacggcaccgccggcggcgcgatccaggcg
ctcgccgcgcaacacctggcgggcaaggtgccggtgtcgggccaggacgcggacctcgcc
gccgtgaagcgcgtggtggccggcacgcagacgatgaccgtctacaagccgctcaagctg
atcgcgggcgaagccgcgaacctcgccgtgcaactcgcgaagggcgagaagcccgcctac
aacgcgcagtacgacaacggcaagaagaaggtcgacacggtgctcctgcagccgacgctc
ttgacgaagagcaacgtcgacatcgtcgtcaaggatggcttctatacgcaggcgcagctc
gcgagccaataa
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