Trinickia violacea: FAZ95_19160
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Entry
FAZ95_19160 CDS
T09503
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
tvl
Trinickia violacea
Pathway
tvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FAZ95_19160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvl03019
]
FAZ95_19160
Messenger RNA biogenesis [BR:
tvl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FAZ95_19160
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Ortholog
Paralog
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GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
QCP51081
UniProt:
A0A4P8IS88
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All DBs
Position
1:4199814..4200512
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AA seq
232 aa
AA seq
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MLDREGFRPNVGIILLNAHNEVFWGKRLREHSWQFPQGGIKYGETPMQAMYRELHEETGL
LPEHVKIIGRTRDWLRYEVPDKFIKREVRGHYRGQKQIWFLLRMVGRDCDICLRATDHPE
FDAWRWNEYWVPLDAVIEFKRDVYQLALTELSRFLRRPAPRAEKPRGHHGQRYPRVAASV
TASAMGTITQVTIEATIETVESAGTVNTIGSEDGSDCLSAEPSDEQTRILRG
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgctggatcgtgaaggctttcgcccgaacgtcggcatcatcctcttgaacgcgcacaac
gaggtgttttggggtaagcggctgcgtgaacattcctggcaatttccgcaagggggcatc
aagtacggtgagacccccatgcaagcgatgtatcgggagttacacgaagaaaccggcttg
cttccggagcacgtcaagatcatcggtcgcacgcgcgactggttgcgttatgaggtgccg
gacaagttcatcaagcgtgaagtacgcggtcattaccgcggccagaaacagatctggttt
ctgctgcggatggtcggacgcgattgcgacatttgcttgcgcgcaaccgatcatccggag
ttcgacgcttggcgttggaacgagtactgggtgccgctcgacgcggtaatcgagttcaag
agagatgtgtatcagttggcgttgacggagttgtcgcggttcctgcggcgtccggcgccg
cgcgcggaaaaaccgcgcgggcatcacgggcaacggtatccgcgcgtcgcggcgtcggtg
acggcgtccgcgatgggcacgatcacccaggtgacgatcgaagcgacgatcgagactgtg
gagtctgctggcacggtcaacacgataggctcggaagacggctcggattgcctgtcggcc
gaaccttccgacgagcaaacgcgcatcctgcgcggctaa
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