Trinickia violacea: FAZ95_19475
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Entry
FAZ95_19475 CDS
T09503
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tvl
Trinickia violacea
Pathway
tvl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FAZ95_19475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvl03400
]
FAZ95_19475
Enzymes [BR:
tvl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FAZ95_19475
DNA repair and recombination proteins [BR:
tvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FAZ95_19475
Prokaryotic type
FAZ95_19475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QCP51135
UniProt:
A0A4P8ITM9
LinkDB
All DBs
Position
1:4267693..4268496
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AA seq
267 aa
AA seq
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MTSASRSRSRSSQASLFDAPSSALSAPPIESLEAQFDALPAAWRAHLRPFIASDAYAPLC
RFVDDERTEGKTIYPADVFRALRLTSPDDVKVVILGQDPYHGDDRGHPQAHGLAFSVPPS
VRPPPSLRNIFKEIAANFGYETPRHGCLDAWAKQGVLLLNTVLTVERGLAASHAKRGWEK
CTDTLIHELAMRHDGLVFMLWGAHAQAKRTLLEDKPHCVLEAPHPSPLSAHRGFLGCRHF
AMANDYLTANGRDPIDWRLPEATEVLA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgcctcccgctcccgttcccgctcgtcgcaagcctcgcttttcgacgcaccg
tcatccgcgctgtccgcgccgccgattgaatcgctcgaagcgcagttcgacgcgctaccg
gctgcctggcgcgcgcatctccgtccgttcatcgccagcgacgcctacgcgccgctatgc
cgctttgtcgacgacgaacgcacggagggcaagacgatctatcccgccgatgtgttccgc
gcccttcgcctgacgagcccggacgacgtaaaagtcgtcatcctcggccaagacccctat
cacggcgacgaccgcggacacccgcaagcccatgggctcgcgttttccgtgccgccatcg
gtacgaccgccgccgtcgctgcgcaacattttcaaggaaatcgccgcgaatttcggctac
gagacgccgcgccacggatgtctcgacgcgtgggcgaaacaaggcgtgctgttgctgaac
acggtgctgacggtcgagcgcggcctggcggcaagccacgcgaaacgcggctgggaaaaa
tgcaccgatacgctgatccacgaactcgccatgcgccatgacgggctcgttttcatgctg
tggggcgcacacgcgcaggcaaagcgaacgctgctggaagacaagccgcattgcgtgctc
gaggcgccccatccctctccgctatccgcacatcgtggctttctcggttgccgccatttc
gcgatggcgaacgattatctgaccgccaacggccgcgatccgatcgattggcgcctgccg
gaagcaaccgaggtactcgcctga
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