Trinickia violacea: FAZ95_20005
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Entry
FAZ95_20005 CDS
T09503
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tvl
Trinickia violacea
Pathway
tvl00300
Lysine biosynthesis
tvl00470
D-Amino acid metabolism
tvl01100
Metabolic pathways
tvl01110
Biosynthesis of secondary metabolites
tvl01120
Microbial metabolism in diverse environments
tvl01230
Biosynthesis of amino acids
Module
tvl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FAZ95_20005 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FAZ95_20005 (lysA)
Enzymes [BR:
tvl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FAZ95_20005 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
SH3BP5
Exo70_N
Motif
Other DBs
NCBI-ProteinID:
QCP51237
UniProt:
A0A4P8IT11
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All DBs
Position
1:4374817..4376079
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AA seq
420 aa
AA seq
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MSQSAFAFVDGVLHAEGVSAVSLAEQFGTPLYVYSRAALTQAYQAYANACAGRRASVHVA
VKANSNLAVLNVFARLGAGFDIVSSGELARVLAAGGKAENTVFSGVGKSAGEMREALAAG
VKCFNVESIPELDRLNAVAASMGKTAPVSLRVNPDVDPKTHPYISTGLKANKFGVAFDDA
RATYRAAASMPNLHVVGIDCHIGSQITEISPYLDAVDRLLELVEQIEADGTKIHHIDVGG
GLGIQYDTETPPDIGEFVKTLLDHIDARGHGHREVFFEPGRSVTGNAGILLTRVEFLKPG
EEKNFAIVDAAMNDLARPAMYQAFHAIEPAVTRDAAAHVYDVVGPVCESGDWLGRDRQLA
IEAGDLLAIRSAGAYGFVMSSNYNTRPRAAEVMVDGNDAHVVRARENVKDLFAGETVLPK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatccgcattcgccttcgtcgacggcgtgctgcacgccgaaggtgtgtccgcc
gtctcgcttgccgagcaattcggcacccccctgtacgtgtattcgcgcgcggcgctgacg
caggcctaccaggcttatgcgaacgcgtgcgcgggacggcgcgcgtcggtgcacgtcgcc
gtgaaagcgaacagcaacctcgcggtgttgaacgtattcgcacgcctcggcgcgggcttc
gacatcgtatccagcggcgagctcgcgcgcgtgctcgcggccggcggcaaagcggagaac
accgtgttctcgggcgtcggcaagagcgccggggaaatgcgcgaggctctcgccgcgggc
gtgaagtgcttcaacgtcgaatcgattccggaactcgaccggctcaacgcggtggctgcg
tcgatgggcaagacggcgcccgtctcgctgcgcgtgaatcccgatgtcgatccgaaaacg
catccgtacatttcgaccggcctcaaagccaacaaattcggcgtcgcgttcgacgatgcg
cgtgcgacctaccgcgccgcggcctcgatgccgaacctgcacgtagtcggcatcgactgc
catatcgggtcgcaaatcaccgagatctccccgtacctcgatgccgtcgatcggctcctc
gaactcgtcgagcagatcgaggcggacggtacgaagattcaccacatcgacgtcggcggc
ggcctcggcatccagtacgacacggaaacgccgcccgacatcggcgaattcgtgaagacg
ctgctcgaccacatcgacgcgcgcggccacggccatcgcgaggtgttcttcgagccgggc
cgctcggtcacgggcaatgcgggcatcctgctgacgcgcgtcgaattcctgaagccgggc
gaagagaagaactttgcgatcgtcgatgccgcgatgaacgatctcgcccgccccgcgatg
tatcaggcgttccacgcgatcgaacccgccgtgacgcgcgacgcggcggcgcacgtgtat
gacgtggttggccctgtctgcgaaagcggcgactggctcggccgcgaccggcaactggcg
atcgaagcgggcgacctgctcgcgatccgctcggccggtgcgtatgggttcgtgatgagc
tcgaactacaacacgcgtccgcgagccgccgaggtgatggtcgacggcaacgacgcgcac
gtcgtgcgtgcgcgcgaaaacgtgaaggacctgttcgccggcgagacggtgctgccgaag
taa
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