Trinickia violacea: FAZ95_20515
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Entry
FAZ95_20515 CDS
T09503
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
tvl
Trinickia violacea
Pathway
tvl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FAZ95_20515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvl02000
]
FAZ95_20515
Transporters [BR:
tvl02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
FAZ95_20515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
QCP51874
UniProt:
A0A4P8IXG8
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All DBs
Position
1:4474904..4475911
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AA seq
335 aa
AA seq
DB search
MLGFACANAAHAAGGKITFVSQGGAYQEAQTKAILDPAAKQLGITINQDSIPDAWPAIKA
QGATGKPIWDVVDTPQSNCLRGGHDGLLETLDFSKIPNAAAMPAQYRTPYSVAYEFYSTV
IAYNKKTLKKTPSSWADFWNVKDFPGQRALRNDPQTVLEAALLADGVPRDKIYPLDVDRA
FKKLAQIKPNIAVWWTSGGQAAQLLHDGEVDMEMIWNGRASAVMKDNPDIGFTYNDGILQ
NTQLCVLKNAPNLNTAVQFINAAVSPDLQANLPLYIDYGPGNPAAFKTGKISAQRAAELP
SSPQNAAKQVLMQEEWWASPAGIDAKARWLKFMQQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcttggcttcgcctgcgcgaatgcggcgcacgcggcaggcggcaagatcaccttcgtg
tcgcaaggcggcgcgtatcaggaagcgcagacgaaggccatcctcgatcccgccgcgaaa
caactcggcatcacgatcaaccaggacagcattccggacgcgtggcccgccatcaaggcg
caaggcgcgaccggcaagccgatctgggacgtcgtcgacacgccgcaatcgaactgtctg
cgcggcggccacgacggcctgctcgaaacgctcgacttctcgaagatcccgaacgccgcg
gcgatgcccgcgcaataccgcacgccgtattcggtcgcctacgagttctattcgacggtg
atcgcctacaacaagaagacgctgaagaagacgccgagcagttgggccgacttctggaac
gtgaaggatttcccgggccagcgcgcgctgcgcaacgacccgcaaacggtgctcgaagcc
gcgctgctcgccgacggcgtgccgcgcgacaagatttatccgctcgacgtcgaccgcgcg
ttcaagaagctcgcgcagatcaagccgaacatcgcggtgtggtggacctcgggcggccag
gcggcgcaactgctgcacgacggcgaagtcgacatggagatgatctggaacggacgcgcg
agcgccgtgatgaaggacaaccccgatatcggctttacgtacaacgacgggattctgcag
aacacgcagctttgcgtgctcaagaacgcgccgaacctgaataccgccgtgcaattcatc
aacgcggcggtgtcgcccgatttgcaggcgaatctgccgctctacatcgattacggtccc
ggcaacccggccgcgttcaagaccggcaagatctcggcgcagcgcgccgccgagcttccg
agctcgccgcagaacgccgcgaaacaggtgctgatgcaggaggaatggtgggcgtcgccg
gcggggatcgatgcgaaggcgcggtggttgaagttcatgcagcagtaa
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