Trinickia violacea: FAZ95_20940
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Entry
FAZ95_20940 CDS
T09503
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
tvl
Trinickia violacea
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tvl01011
]
FAZ95_20940
Enzymes [BR:
tvl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FAZ95_20940
Peptidoglycan biosynthesis and degradation proteins [BR:
tvl01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FAZ95_20940
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Motif
Other DBs
NCBI-ProteinID:
QCP51401
UniProt:
A0A4P8ISZ3
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All DBs
Position
1:complement(4567950..4569917)
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AA seq
655 aa
AA seq
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MFNRLHRVYRAVSFALAAATLVACGTASAVRPAPLSPLSGDDQIFIQLREAARNNDPDRA
AQLASMIPNYPAPTYLEYFQIKPQLFDGSGHAKLDAPDEPVLSFLQRYDGTAIADRLRND
YLAVLGARHDWKNFDAQYARFVLNDDTQVKCYALESKMSRGENVADAARVLLVEPKWYGD
GCVDLITALGGSQQFTPNDVWQQIRLSYEQGQTATGGKLVDALGSAAPDPTLFQQATTTP
PLLLAKGVTSDSTSHQLALVAITRMAANDPATAAATFAAVAPSLAAPERAIGWGTIAYQA
AARQVSGAVDWFRLSANAPLSYPAYEWRVRSALLAGDWTMVRWSIEQMPAELRARPAWVY
WHGRALKQLGDTVNANQDFEQIAGNFNFYGQLASEELGQKITIPPQTKVTDEEVEQASQT
PGFALAQRFFALNLRLEGNREWNWPLRQMTDRQLLAAAEYARRIELYDRTVNTADRTQVE
HDFSLRYLSPFRDIVERDAQSNGLDVEWAYGLIRQESRFIINARSEVGAGGLMQLMPGTA
QMVAKKIGLGPLSRAQMNDINTNILLGTNYLSMIYNQFDGSAVLATAGYNAGPGRPRQWK
ANLSRGVEGAIFAETIPFNETRDYVKNVLSNTVYYAALFEGKPQSLKERLGYIMP
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatcgacttcaccgagtatatcgcgcggtcagttttgctcttgccgctgcgacg
ctcgtcgcgtgcggcacggcttccgccgtgcgtcccgcccccctctccccgctctccggc
gacgatcagattttcatccagttgcgtgaggccgcccgcaacaacgatcccgatcgcgcg
gcgcagctggcgagcatgatcccgaattacccggcgccgacgtatctcgaatacttccag
atcaagccgcagcttttcgacggctcggggcacgcgaagctcgacgcgccggatgagccg
gtgctgtccttcctgcagcgctacgacggcacggcgatcgccgaccgtctgcgcaacgat
tacctcgccgtgctcggcgcgcgtcacgattggaagaacttcgacgcgcaatatgcgcgc
ttcgtgctgaacgacgacacgcaagtgaagtgctacgcgctcgaatcgaagatgtcgcga
ggcgagaacgttgccgacgcggcgcgcgtgctgctggtcgagccgaagtggtacggcgac
ggttgcgtcgacctgatcacggcgctcgggggcagccagcaattcacgccgaacgacgtc
tggcagcagatccgtctgtcgtacgagcaaggccaaacggcgacgggcggcaagctcgtc
gatgcgctcggttccgccgcgcccgacccgacgctcttccagcaggccaccaccacgccg
ccgctcttgctcgccaagggcgtgacgtccgattcgacctcgcatcagctggcgctggtc
gccatcacacgcatggcggccaacgacccggccacggccgctgccacgttcgcggcggtg
gcgccgtcgctcgccgcgcccgagcgcgcgatcggctggggcacgatcgcctatcaggcg
gcggcacggcaggtttcgggcgcggtcgactggttccggctgtcggcgaacgcgccgctt
tcgtatccggcctacgagtggcgcgtgcgcagcgcactgctcgccggcgactggacgatg
gtgcgctggtcgatcgaacagatgccggccgagctgcgcgcgcgtccggcgtgggtctac
tggcatgggcgcgccttgaaacagctcggcgacaccgtgaacgccaaccaggacttcgag
caaatcgctgggaacttcaatttctacggtcagctcgcgtccgaggaactcggccagaag
atcacgattccgccgcaaaccaaagtgacggacgaagaagtggagcaagcgtcccagacg
ccgggcttcgcgctcgcgcagcgcttcttcgcgctgaatctgcggctcgaaggcaatcgc
gagtggaactggccgctgcgccagatgaccgatcgccagcttctcgccgccgccgagtac
gcgcgccgtatcgagctgtatgaccgcaccgtcaataccgccgaccgcacccaggtcgag
cacgacttctcgctgcgctacctgtcgccgttccgcgatatcgtcgagcgcgacgcgcag
tccaacgggctcgacgtcgaatgggcctacggcctgattcgtcaggagtcgcgcttcatc
atcaacgcgcgttcggaagtcggtgcgggcggcctgatgcagctgatgccgggcacggcg
cagatggtggcgaaaaagatcggcctcggcccgctctcgcgagcccagatgaacgacatc
aacaccaatatcctgctcggcacgaactatttgtcgatgatctacaatcaattcgacggt
tccgccgtgctcgccacggccggctacaacgccggtcccggccgtccgcgccagtggaag
gccaacctttcgcgcggcgtggaaggcgcgatcttcgcggaaacgattccgttcaacgag
acccgcgactacgtcaagaacgtgctgtcgaacacggtctattacgcggcgctgttcgaa
ggcaagccgcaatcgctgaaagagcggctcggctacatcatgccctga
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