Trinickia violacea: FAZ95_21495
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Entry
FAZ95_21495 CDS
T09503
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tvl
Trinickia violacea
Pathway
tvl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FAZ95_21495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvl03400
]
FAZ95_21495
Enzymes [BR:
tvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FAZ95_21495
DNA repair and recombination proteins [BR:
tvl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FAZ95_21495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
Zn-ribbon_GIR1
DZR
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
QCP51884
UniProt:
A0A4P8IXH8
LinkDB
All DBs
Position
1:complement(4685322..4687574)
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AA seq
750 aa
AA seq
DB search
MFVRVALDHPLPTLFDYRGEPSTQLAPGMLVQVPFGKRHVVGLVCEVTAHSDVPPERLRD
AGALCAACPPLSAEWLALAAFAADYYQRGLGEVALPALPQALRDASRWARLFAPEERYRL
TPAGRSALPDALPARASALRRLADALAAAESIEAAEARAIHPKAIATLAAWQADGWAERQ
VIDAAAARDLPRLANTELPDPLPIQRPTLTAEQAQAVDAIGAADSFAPFLLHGVTGSGKT
EVYLHALSALLDARPDAQALVLVPEINLTPQFEAAFRARFAALPDDAIVTLHSGLAEGER
ARNWFAAHLGQARIVLGTRLAVLASLPKLALIVVDEEHDPAYKQQEGLRYSARDLAVWRA
KQLEIPVVLGSATPSLESWWQADQGRYKRLTLARRAVADAALPAVRLIDLEEERRRGRAS
LEGLSGPLVAALKGRLERGEQSLVFLNRRGYAPALSCDACGWVAGCPRCSAYVVLHKPER
ALRCHHCGWEARIPRSCPECGNVDIAPLGRGTQRVEEALATAVPGARVLRIDADSTRRKG
SAQALFSDVHAGEVDILVGTQMIAKGHDFQRVSLVGVLNADTALFSHDFRASERLFAQLM
QVSGRAGRAGLPGEVLVQTRYPRHALYHALGRHDYVGFANSTLAERRDAHLPPFVYQALL
RAEGRTLEAALAFLQQAAAALAGISAAERVTVYDAVPMTIVKVANVHRAQLLLESASRQA
LQATLRAWQPALRALKGVLRWSVEVDPLDI
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgtccgcgtcgcgctcgatcatccgctgccgacgctgttcgactatcgcggcgag
ccgtcgacgcagctcgcaccgggcatgctcgtgcaggtgccgtttgggaagcggcacgtg
gtggggcttgtttgcgaagtgaccgctcacagtgacgtgccgcccgagcggctgcgcgat
gccggcgcgctttgcgcggcttgtccgccgctgtccgccgagtggctcgcgctcgcggcg
ttcgcggcggactactaccagcgcgggcttggcgaggtggcgctgccggccttgccgcag
gcgttgcgcgatgcgtcgcgatgggcgcggctgttcgcgccggaggagcgctatcggctg
acgcccgcgggccgttctgcgctgccggatgcgctgcccgcccgcgctagcgcgctgcgt
cggctggccgacgcgctcgccgctgccgaatcgatcgaagccgccgaggcccgagcgatc
catccgaaggcgattgcgacgctcgcggcatggcaggccgacggctgggccgagcgtcag
gtgatcgacgcggctgcggcgcgcgatctaccacgcctcgccaacaccgagttgcccgac
ccgctcccgattcaacgcccgacgctcaccgccgaacaagcccaagcagtcgatgcaatc
ggcgcggctgacagcttcgcgccgtttctgctccacggcgtgacgggcagcggcaagacc
gaggtctatctacacgcgctgtcggcgttgctcgacgcacgccccgatgcccaggcgctc
gtgctcgtccccgaaatcaatctgacgcctcagttcgaggcggcttttcgcgcgcgtttc
gcggcgttgcccgacgatgcgatcgtgacgctgcacagcggactcgccgaaggcgagcgc
gcccgcaactggttcgcggcgcacctcgggcaagcgcgcatcgtgctcggcacacggctc
gcggtgctggcgtcgctgccgaagctcgcgttgatcgtcgtcgacgaggaacacgaccca
gcctacaagcagcaggaagggttgcgctattcggcgcgcgatctcgccgtctggcgcgcg
aagcagctcgagataccggttgtgctgggctcggccacgccgtcgctcgaaagctggtgg
caggccgatcagggccgctacaagcggctcacgctcgcgcgccgggcggtcgccgatgcg
gcgctgcccgccgtccggctgatcgatctcgaagaggagcggcggcgcggacgggcgtcg
ctcgaagggttgtcggggccgctcgtcgccgcgctcaagggccggctggaacgcggcgag
cagagcctcgtgttcctgaaccggcgcggctatgcgccggcgctgtcgtgcgacgcgtgc
ggctgggtggccggttgcccgcgctgcagcgcctacgtcgtgctccacaagcccgagcgc
gcgctgcgctgccatcactgcggctgggaggcgcgcattccgcgttcatgcccggaatgc
ggcaacgtcgatatagcgccgctggggcgcggcacgcagcgcgtcgaggaggcgctcgcc
accgcggtgccgggtgcccgcgtgctgcgcatcgatgcggacagcacgcgccgcaaaggc
agcgcgcaggccttgttttccgatgtgcacgcgggcgaggtcgacatcctcgtcggcacg
caaatgatcgccaaaggacacgatttccagcgcgtgtcgctcgtcggcgtgctgaacgcg
gacacggcactgttttcgcacgatttccgcgcgagcgagcggctgttcgcgcaactgatg
caggtcagcggccgggcggggcgcgccgggctgccgggcgaagtgctcgtgcagacgcgc
tatccgcgtcatgcgctctatcacgcgctcgggcggcacgattacgtcggctttgccaat
tcgacgctcgccgagcggcgcgacgcgcatctgccgccgttcgtctatcaggcgctgttg
cgcgccgagggacgcacgctcgaagcggcgctcgcgttcctgcagcaagccgccgctgcg
ctcgccgggatttcggcggcggagcgcgtcacggtctacgacgcggtgccgatgacgatc
gtcaaagtggcgaatgtccatcgcgcgcagctgctgctcgaaagcgcttcgcgccaggca
ctgcaggcgacgttgcgtgcgtggcagcccgcgttgcgcgcgttaaagggtgtgctgcgc
tggagcgtcgaagtcgatccgctcgatatctag
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