KEGG   Trinickia violacea: FAZ95_23130
Entry
FAZ95_23130       CDS       T09503                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
tvl  Trinickia violacea
Brite
KEGG Orthology (KO) [BR:tvl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tvl02044]
    FAZ95_23130 (tssC)
Secretion system [BR:tvl02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FAZ95_23130 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QCP52089
UniProt: A0A4P8J195
LinkDB
Position
2:complement(251453..252949)
AA seq 498 aa
METNSAVEGAAAATTTQEGELSLLDRIVQEGNMAVEPSQGVYAKKLIGQLASQILDEGMR
TSPDKSVVNMIHERVAEIDRLLTDQMNAIMHDPAFQALEASWSGLHDMVYGTETGTNLKL
RLLNVSKKDLLKDLESAVDHDMSVLFKKVYEEEYGTFGGHPYSLLIGDYTFGRHPQDVAL
LERISRVAAAAHAPFVAAAAPSLFDIKSYTDLGVTRDLSKIFESAELATWRGFRESEDSR
YVSLVLPSYAARLPYGAKTKPIESFNFEEDVDGTDHGKYLWANSAYQLGLRITDAFAKYS
WSTAIRGVEGGGKVDGIAAHAYKTSEGDVALKCPTEVTITDRREKELSDLGFIALVNSKG
SNYAAFFGGQTVNKPTLYNKDAANANAQLSARLPFVLAASRFAHYIKVIMRDKVGSFQTR
TDVENYLNNWIADYVLINPSASQAQKARYPLGEARVDVTEVPGKPGAYRATCFLKPHFQM
EELTASIRLVADLPEAAA
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggaaacgaattccgccgtcgaaggcgcagcagccgcgacgaccacgcaggaaggcgag
ctgagcctgctcgatcgcatcgttcaggaaggcaacatggccgtcgagccttcgcaaggc
gtctacgcaaagaagctgatcggccagctcgcatcgcagattctcgacgaaggcatgcgc
acgagcccggacaagagcgtcgtgaacatgattcacgagcgtgtcgccgaaatcgaccgc
ctgttgaccgaccagatgaacgcgatcatgcacgaccccgcattccaggcgctcgaagcg
tcgtggagcggtctgcacgacatggtgtacggcacggagacgggcaccaacctcaagctg
cgtttgctcaacgtctcgaagaaggacctgctcaaggatctcgagtcggcggtcgaccac
gacatgagcgtgctgttcaagaaggtctatgaggaagagtacggcacgttcggcggtcat
ccgtattcgctgctgatcggcgactacacgttcggccgtcatccgcaggatgtcgcgctg
ctggagcgcatctcccgcgtggcggcggcagcgcacgcgccgttcgtcgcggcagccgcg
ccgagcctgttcgacatcaagtcgtacaccgacctgggcgtcacgcgcgatctgtcgaaa
atcttcgagagcgccgaactggccacctggcgcggcttccgggaatccgaagattcccgc
tatgtctcgctggtcctgccgagctacgccgcgcgtctgccgtatggcgccaagacgaag
cccatcgagtcgttcaatttcgaagaagatgtggacggcaccgatcacggcaagtatctg
tgggcgaactccgcctaccagctcggcctgcgcatcaccgatgcctttgcgaaatacagc
tggtcgaccgcgatccgcggcgtggaaggcggcggcaaggtggacggcatcgccgcgcac
gcctacaagacgagcgagggcgatgtcgcgctcaagtgcccgacggaagtgacgatcacg
gatcgccgcgagaaggaattgagcgatctgggctttatcgcgctcgtgaattccaagggc
tcgaactacgccgcgttcttcggcggccagacggtgaacaagccgacgctctacaacaag
gatgcggccaacgccaatgcgcaattgtcggcacgcctgccgttcgtgctggcggcgtca
cgcttcgcgcattacatcaaggtcatcatgcgcgacaaagtggggagcttccagactcgc
accgatgtcgagaactacctgaacaactggatcgccgactacgtgctgatcaatccctcg
gcatcgcaggcgcaaaaggcccgctatccgctgggcgaagcgcgggtggacgtcaccgag
gtgccgggcaagccgggtgcctatcgcgcgacctgtttcctgaagccgcacttccagatg
gaggagctgacagcttcgatccgtctggtggcggatctcccggaagccgcagcctga

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