Trinickia violacea: FAZ95_23275
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Entry
FAZ95_23275 CDS
T09503
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tvl
Trinickia violacea
Pathway
tvl00260
Glycine, serine and threonine metabolism
tvl00460
Cyanoamino acid metabolism
tvl00630
Glyoxylate and dicarboxylate metabolism
tvl00670
One carbon pool by folate
tvl00680
Methane metabolism
tvl01100
Metabolic pathways
tvl01110
Biosynthesis of secondary metabolites
tvl01120
Microbial metabolism in diverse environments
tvl01200
Carbon metabolism
tvl01230
Biosynthesis of amino acids
tvl01240
Biosynthesis of cofactors
tvl04981
Folate transport and metabolism
Module
tvl_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FAZ95_23275
09102 Energy metabolism
00680 Methane metabolism
FAZ95_23275
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FAZ95_23275
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FAZ95_23275
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FAZ95_23275
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FAZ95_23275
Enzymes [BR:
tvl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FAZ95_23275
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QCP52115
UniProt:
A0A4P8IW57
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All DBs
Position
2:complement(291183..292457)
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AA seq
424 aa
AA seq
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MSNTQSFFSQPLAQRDGSVQNALLKELERQQSQVELIASENIVSRAVLEAQGSVLTNKYA
EGYPGKRYYGGCEFVDEVETLAIDRVKQIFGAGYANVQPHSGAQANGAVMLALAKPGDTV
LGMSLDAGGHLTHGAKPALSGKWFNAVQYGVNRDTMLIDYDQVEALAHQHKPSLVIAGFS
AYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPR
GGFVLTNDEDIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEVLQADFKTYIDNVLANAQA
LGEVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGTQVEQALERAGITCNKNGIPFDTEKPT
VTSGIRLGTPAGTTRGFGVAAFREIGRLILEVFDALRANPEGDHATEQRVRREIFALCER
FPIY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacactcaatctttcttctcgcagcccttggcccagcgcgacgggtcggttcaa
aacgcgctcctgaaggaactcgagcggcagcagtcgcaggtcgagctgatcgcgtcggaa
aacatcgtgtcgcgcgccgtgctcgaagcacaaggctccgtgctgaccaataagtacgcg
gaggggtatccgggcaagcgttactacggcggttgcgaattcgtcgacgaggtcgagacg
ctcgcgatcgatcgcgtcaagcagatcttcggcgcgggctacgcgaacgtgcagccgcat
tcgggcgcgcaagcgaatggcgcggtgatgctcgcgctggcgaagccgggcgacacggtg
ctcggcatgtcgctcgatgcgggtggccatctcacgcatggcgcgaagccggcactctcg
ggcaagtggttcaacgcggtgcagtacggcgtgaatcgcgacacgatgttgatcgactac
gaccaggtcgaggcgctcgcgcaccagcacaagccgagtctcgtcatcgcgggcttttcc
gcgtatccgcgcaagctcgacttcgcgcgtttccgggcgatcgccgacagcgtcggcgcc
aagctgatggtggacatggcgcacatcgcgggcgtcatcgcggcgggtcgccacgcgaac
ccggtcgagcacgcgcacgtcgtcacgtccacgacgcacaagacgctacgcggcccgcgc
gggggttttgtcctgaccaacgacgaagacatcgcgaagaagattaattccgcggtgttc
cccggcctgcagggcggtccgctgatgcacgtgatcgcgggcaaggcggtcgccttcggc
gaggtgttgcaggctgacttcaagacctacatcgacaacgtgctcgcgaatgcgcaggcg
ctcggcgaggtgcttaaggcgggcggcgtcgatctcgtgacgggcggcacggacaaccat
ttgctgctcgtcgatctgcgtccgaagggtctcaagggcacgcaagtcgagcaggcgctc
gaacgcgcgggcatcacctgcaacaagaacggcattccgttcgacaccgagaagccgacc
gtcacgtcgggcatccgtctcggcacgccggccggcacgacgcgcggcttcggcgtcgcg
gcgttccgcgagatcggccgcctgatcctcgaggtgttcgacgcgctgcgcgcgaacccg
gaaggggaccatgcgactgagcagcgcgtgcgccgcgagatcttcgcgctgtgcgagcgc
tttccgatctactga
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