Trinickia violacea: FAZ95_24120
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Entry
FAZ95_24120 CDS
T09503
Name
(GenBank) arabinose ABC transporter substrate-binding protein
KO
K10537
L-arabinose transport system substrate-binding protein
Organism
tvl
Trinickia violacea
Pathway
tvl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FAZ95_24120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvl02000
]
FAZ95_24120
Transporters [BR:
tvl02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
L-Arabinose transporter
FAZ95_24120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
QCP52270
UniProt:
A0A4V1EI23
LinkDB
All DBs
Position
2:464548..465555
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AA seq
335 aa
AA seq
DB search
MTSKLRRLTLCAAMATLFAAPLAMTQSIAHADEPLKIGFLVKMPEQAWFINEQKAATALG
QKQGFSVVNIGTPDGEKVLAAIDNLGAQGAKGFVICAPDVRLGPAIEARAKRYSMKFVTV
DDQLVDSSGKPLGDVPHLGMSAFKIGNQVGQAISDEMKRRGWNPDEVGAIRISDYELPTA
KLRTDGATQTLLASGFKKDNIFDAPQKTTDDEGGFNAASPVFAKHPNIKKWVIFALNEET
VIGGVRASEQLHIPSADVIGVGINGAGEAFAELQRKEPTGFYGTIAVSSTNHGKQSTENL
VDWIKTGKQPPADTQTTGKLMTRDNWKQVRDELGI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcaaacttcgacgcctgacgctgtgcgccgcgatggccacgctgttcgcggcg
cccctggcgatgacgcaatcgatcgcgcatgccgacgagccgctcaagatcggcttcctc
gtgaagatgcccgagcaggcatggttcatcaacgagcagaaggcggcgacggcgctcggc
cagaagcaaggcttctcggtcgtcaacatcggcacgcccgacggcgagaaggtgctcgcc
gcgatcgacaacctcggcgcgcaaggcgcgaagggcttcgtgatctgcgcgcccgacgtg
cggctcggaccggccatcgaggcgcgcgcgaagcgctacagcatgaagttcgtgacggtg
gacgatcagctcgtcgattcgtcgggcaagccgctcggcgacgtgccgcacctcggcatg
tcggcgttcaagatcggcaaccaggtcgggcaggcgatctccgacgagatgaagcgccgc
ggctggaaccccgatgaagtgggcgccatccgcatctccgactacgagctgccgacggcc
aagctgcgcacggacggcgcgacgcagacgctgctcgcgagcggcttcaagaaggacaac
atcttcgacgcgccgcaaaagacgaccgacgacgaaggcggcttcaacgcggcctcgccg
gtgttcgccaagcacccgaacatcaagaagtgggtgatcttcgcgctgaacgaggaaacg
gtgatcggcggcgtgcgcgcatcggagcagctgcacattccgtccgcggacgtgatcggc
gtcggcatcaacggcgcgggcgaagcgttcgccgaactgcagcgcaaggaaccgacgggc
ttctacggcacgatcgcggtcagctcgacgaaccacggcaagcagagcaccgagaacctc
gtcgactggatcaagacgggcaagcaaccgccggccgatacgcagaccacgggcaagttg
atgacgcgcgacaactggaagcaagtgcgcgacgaactcgggatctga
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