Trinickia violacea: FAZ95_24140
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Entry
FAZ95_24140 CDS
T09503
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tvl
Trinickia violacea
Pathway
tvl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FAZ95_24140
09124 Replication and repair
03420 Nucleotide excision repair
FAZ95_24140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvl03021
]
FAZ95_24140
03036 Chromosome and associated proteins [BR:
tvl03036
]
FAZ95_24140
03400 DNA repair and recombination proteins [BR:
tvl03400
]
FAZ95_24140
Enzymes [BR:
tvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
FAZ95_24140
Transcription machinery [BR:
tvl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FAZ95_24140
Chromosome and associated proteins [BR:
tvl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
FAZ95_24140
DNA repair and recombination proteins [BR:
tvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FAZ95_24140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
DUF7711
Motif
Other DBs
NCBI-ProteinID:
QCP52274
UniProt:
A0A4P8IYG1
LinkDB
All DBs
Position
2:complement(469430..471718)
Genome browser
AA seq
762 aa
AA seq
DB search
MTYVVAVRALCEFTAKRGDLDLRFTPAPTALEGIAGHATVAARRASGYEAEITLAGTYRD
LTVRGRADGYDAALNRLEEVKTYRGDLDAMPANHRALHWAQALVYGHLLCQARALSQLDV
ALVYFDIGSQKETVLTQSHDAASLESFFVEQCERFLDWAAQEAAHRDARNAALGALKFPH
ERFRSGQRELAVAVYRAARDGQTLMAQAPTGIGKTLATIFPMLKACGEDRVERVFFLTAK
TPGRALALEAIDTLHASASASAGTGTPLPLRTLELVARDKACEHPDKSCHGDSCPLARGF
YDRLHDARSAALDGSRRLDREAVRAAALAHDVCPYYLAQELARWSDVVVGDYNYFYDSSA
LLFALTRLNQWRVAVLVDEAHNLLERARKMYTASLEQSDFRAARKSAPETLKKPLERLHR
EWNALNRAQTDAYQVHAEVPARLLSAAQNLIGAVTDQLVEAPLSIDDALLRVFFDAMHFV
ALAEQFGEHSIFDVTRDETSRGARAQSASTLCVRNVIPAPYLAPRYDAAHTTVMFSGTLN
PFHFYRDTLGLPEATNWLEVDGPFRAQQLKVHVAAHVSTRWRDRERSLAPIVELIAQQYA
AQPGNYLGFLSSFDYLERVAALLRERHPTLPIWTQAPGMDEAARDAFLARFRDTRCGIGF
AVLGGAFSEGVDLVGEQLIGAFIATLGLPQLNAVNEQMRRTMEAKFGNGYDYVYLYPGLQ
KVVQAAGRVIRTEHDAGVVHLIDDRYRRREVRRLLPGWWQLP
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgacctacgtcgtcgccgtacgcgccctctgcgagttcacggccaaacgcggcgatctc
gacctgcgcttcacgccggcccccaccgcgctcgaaggcatcgccggtcacgcaaccgtc
gccgcgcgtcgagcgagcggttacgaggcagagatcacgctcgccggcacgtatcgcgat
ctcaccgtgcgcggccgcgccgacggctacgacgccgcgctcaaccggctcgaggaagtg
aaaacctatcgcggcgatctcgacgcgatgccggccaatcatcgcgccctgcattgggcg
caggcgctcgtctacggacatctgctttgtcaggcgcgcgcgctctcgcagctcgacgtc
gcgctcgtgtacttcgatatcggcagccagaaggaaacggtgctgacgcaatcgcatgac
gcggcgtcgctggaatcgtttttcgtcgaacaatgcgagcgctttctcgattgggccgcg
caggaagcggcccaccgcgacgcacgcaacgccgcactcggtgcgctcaagtttccgcat
gagcgctttcgaagcggccagcgtgaactggcagtcgcggtctatcgggccgcgcgcgac
ggccagaccttgatggcgcaggcgcctaccggcatcggcaagacgctcgcgacgatcttt
ccgatgctgaaagcgtgcggtgaggatcgcgtcgagcgagtcttctttctgaccgcaaag
acccctggccgcgcgttggcgctcgaagccatcgatacgctgcacgcgagcgcgagcgca
agcgcaggcaccggcacgccgctgcccttgcgcacgctcgagctcgtcgcgcgcgacaaa
gcctgcgagcatcccgacaagtcctgtcatggcgattcgtgcccgctcgcgcgcggcttc
tacgatcgtcttcatgacgcgcgcagcgcagcgctcgacggctcgcggcggctcgatcgc
gaagccgtgcgcgccgccgccctcgcacatgacgtctgcccgtactacctcgcgcaagaa
ctcgcgcgctggagcgacgtggtcgtcggcgactacaactacttctacgacagcagcgca
ctgctcttcgcgctcacgcggttgaatcaatggcgcgtcgcggtgctggtcgacgaggcg
cacaacctgctcgaacgcgcgcgcaagatgtacacggcgtcgctcgaacaaagcgacttt
cgcgccgcgcgcaagagcgcgccggaaacgctgaagaagccgctcgaacgactgcaccgc
gaatggaatgccttgaatcgcgctcaaaccgacgcgtaccaagtgcatgcggaagtgccc
gcgcggttgttgtcggcggcgcagaatctgatcggcgcggtcacggatcagctcgtcgaa
gcgccgctatcgatcgacgacgcattgctgcgcgtgttcttcgacgccatgcacttcgtc
gcgcttgccgaacagttcggcgagcactcgatcttcgatgtcacgcgcgatgaaacctca
cgcggcgcgcgcgcccaatccgcttcgacgctatgcgtgcgcaacgtgattccggcgccg
tacctcgcgcctcgctacgacgccgcgcacacgacggtgatgttttccgggacgctgaat
ccattccacttctaccgcgacacgctcggcttgccggaagcgacgaactggctcgaggtc
gacgggccgtttcgcgcgcagcaattgaaagtgcacgtggccgctcacgtctcgacgcgc
tggcgcgaccgcgaacgctcgctcgcaccgatcgtcgagctgatcgcgcaacagtacgcc
gcgcagcccggcaactatctcggctttctgagcagcttcgactatctcgagcgcgtcgcg
gcgttgttgcgcgagcgccatcccacgctgccgatctggactcaggcccccggcatggac
gaagccgcgcgcgacgccttcctcgcgcgctttcgcgacacgcgctgcggcatcggcttc
gctgtgctgggaggcgcgttttccgaaggcgtcgatctcgtcggcgagcagttgatcggc
gcgttcatcgccacgctcggcttgccgcagctgaacgcggtcaatgagcagatgcgccgc
acgatggaggcgaagttcggcaacggctacgattacgtgtacctgtaccccggtctgcaa
aaagtcgtgcaggcagcggggcgcgtgattcgcaccgaacacgatgccggcgtcgtgcat
ctgatcgacgatcgctaccggcgtcgcgaagtccggcgtctcttgccgggctggtggcag
ttgccctga
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integrated database retrieval system
