KEGG   Trinickia violacea: FAZ95_24380
Entry
FAZ95_24380       CDS       T09503                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
tvl  Trinickia violacea
Brite
KEGG Orthology (KO) [BR:tvl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tvl02044]
    FAZ95_24380 (tssC)
Secretion system [BR:tvl02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FAZ95_24380 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 StbA_N
Other DBs
NCBI-ProteinID: QCP52321
UniProt: A0A4P8IV79
LinkDB
Position
2:524793..526283
AA seq 496 aa
MNQQTAAAQLAQVQTDAGPSLLDQIVEKSKVAKSESEHARAKDLIGELVNQVLEGTVVVS
DNLSATIDARVAELDRLISAQLSEVMHAAEFQRMESTWRGLNYLVMESNTGSTIKIKALH
APKRDIVRDFKSASEFDQSALFKKVYEEEFGTFGGAPFGALIGDFEVTRQPEDMYFIEQM
SHVAAAAHAPFIASSSPELLGLESFADLGKPRDLGKVFDTVEYAKWKSFRDAEDSRYVGL
TLPRFLGRLPFNPKDGAIAENFNFLEDVDGTDHSKYLWCNAAWAFGARLTAAFDDFGWCA
AIRGVEGGGLVEDLPTHTFKTDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCKNSDY
AAFFAAQSVQKPKKYSTDSANANAVLSAQLQYIFSVSRVAHYLKAMMRDKIGSFASAQNV
EVFLNRWISQYVLLDDNATQEQKAQFPLREASIQVAEIPGKPGSYRSVAFLRPHFQLDEL
SISLRLVADLPKPAGA
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgaaccagcaaacagccgcggcccaacttgcgcaagtccagacggacgccggaccttct
ttgctcgaccagatcgtcgagaagagcaaggtggcgaagtccgagtcggagcatgcgcgc
gcgaaagatctgatcggcgaactcgtgaaccaggtgctcgaaggcaccgtggtggtgtcc
gacaatctgtcggcgacgatcgatgcgcgcgtcgccgagctcgaccgcctgatttccgcg
cagctttccgaagtgatgcacgcggcggaattccagcgcatggagagcacctggcgcggc
ctcaattatctggtgatggagagcaacaccggctcgaccatcaagatcaaggcgctgcat
gcgcccaagcgcgacatcgtgcgcgacttcaagagcgcgagcgaattcgatcagagcgcg
ctcttcaagaaggtttacgaagaagaattcggcacgttcggcggtgcgccgttcggcgcg
ctgatcggcgacttcgaagtgacgcgccagccggaagacatgtatttcatcgagcagatg
tcgcacgtcgccgcggccgcgcacgcgccgtttatcgcgtcgtcctcgcccgagctgctc
ggcctcgaatcgttcgccgatctcggcaagccgcgcgatctcggcaaggtgttcgacacc
gtcgaatacgcgaagtggaagtcgttccgcgacgccgaagattcgcgctatgtcggcctc
acgctgccgcgctttctcggccgcctgccgttcaatccgaaggacggcgcgatcgccgag
aacttcaacttcctcgaagacgtcgacggcaccgaccattcgaagtacctgtggtgcaac
gcggcgtgggcattcggcgcgcgcttgacggctgcgttcgacgacttcggctggtgcgcg
gcgattcgcggcgtcgaaggcggcggcttggtcgaagacctgccgacgcacacgttcaag
accgacgacggcgagatcgcgctcaaatgcccgaccgaaatcgcgatcacggaccgtcgc
gagaaagagctttcggacctcggcttcatcccgctcgtgcactgcaagaattccgattac
gccgcgttcttcgccgcgcaatcggtgcaaaagccgaagaagtacagcaccgatagcgcc
aacgcgaacgccgtgctgtccgcgcagctgcaatacatcttctcggtgtcgcgcgtggcg
cactacttgaaggcgatgatgcgcgacaagatcggcagcttcgcatcggcgcagaacgtc
gaagtgttcctgaaccgctggatctcgcagtacgtgctgctcgacgacaacgcgacgcaa
gagcaaaaggcgcaattcccgctgcgcgaagcgtcgattcaggtcgccgagattccgggc
aagcccggctcgtatcgctcggtcgcgttcctgcgtccgcacttccagctggacgagctg
tcgatctcgctgcggctcgtcgccgacctgccgaagccggcgggcgcttga

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