Trinickia violacea: FAZ95_25625
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Entry
FAZ95_25625 CDS
T09503
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
tvl
Trinickia violacea
Pathway
tvl02020
Two-component system
tvl02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FAZ95_25625
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FAZ95_25625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tvl02035
]
FAZ95_25625
Bacterial motility proteins [BR:
tvl02035
]
Flagellar system
Chemotaxis proteins
MCPs
FAZ95_25625
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MCPsignal
dCache_1
HAMP
MCP-like_PDC_1
PDZ_1
CDK5RAP3
Motif
Other DBs
NCBI-ProteinID:
QCP52546
UniProt:
A0A4P8IVU5
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Position
2:795975..797747
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AA seq
590 aa
AA seq
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MLSSIRARVVCACVALVVLSVVSSTATNYFIAKASNEEEIDRNLSSDVDNHAVVIGEWVA
SKARMISSLQDVALTSDPVPMLKQVAMAGGFWDIGVGYPNKTAKFTDWPNIPSTYDPTSR
PWYRDAVRAGKPIATPYVSVSGALLVAFAVPVVRDGVLKAVVVGDVALDSVVANVKSIHP
TPTSFGMLIDNGGRVIAHPDRKLTFKPVTDLTPDFDRVTTTPFAVTINDKTKLIRTQSVP
GTDWRVVIALDKSEATAGTRSLLTASLVSLIVIVGIASLIVGVITTTAFRRLRHVCDAMA
AIGSGDGDLTQRLPADGRDEVGDIARSFNNFGEKLQSVMLQIRDASESVRTAANEIATAS
HDLSSRTESAAGSLQQTAASMDEITGIVDQSTAAAREADERSAGAAKIASHGGQLMANVV
TTMARIEKASDRIGEIIGVIDGIAFQTNLLALNAAVEAARAGEQGRGFAVVAQEVRSLAQ
RSAQAAREVKELVESTVASVAAGSVQVRQAGETMSEIVTNVTEVKTIISGITRAANEQTR
GIQEVNRAVTQLDRMVQQNAALVERSAAAATVLQTQANSLASTIEQFKVA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgtccattcgcgcgcgcgttgtttgtgcttgcgtagctcttgtggttctttca
gttgtctccagtaccgcgactaactatttcatcgctaaggcgagcaatgaggaggagatt
gaccgcaacttgagctctgacgtagataaccatgctgtcgttatcggcgagtgggtcgcc
tcgaaggcccgaatgatttcgtcgctgcaggacgttgctctgacgtccgacccggtgcca
atgcttaagcaggttgctatggcgggaggattctgggatatcggcgtcggctatccgaac
aagacggccaagttcactgattggcccaacattccgtccacctacgatcccaccagtcgc
ccctggtacagggatgccgtgcgggccggaaagccgattgccacaccctacgtcagcgtc
agcggggcgttgctggttgcgtttgcggtacccgtggtgcgcgatggtgtgctgaaggct
gtggtcgtgggggatgtggcgttagacagcgtggttgcgaacgtaaaatcgattcatccg
actccgacgagtttcggcatgttgatcgataacggcggccgggtcattgcgcatccggac
cggaagctcacattcaagcctgttactgatctcacaccggatttcgacagagtcactacc
actccgtttgcggtcacgatcaatgataagacgaagctaatacgcacacagtcggtgcca
ggaaccgattggcgcgttgttatcgctctcgacaagtctgaagcgactgcaggaacgcgg
tcgctattgactgcgtcactcgtgtccctcatcgtcatcgtcggcatcgcatcgctaatc
gttggcgttataacgacgaccgcgttccgccgccttagacatgtctgcgacgcgatggcg
gctatcggttcgggtgatggtgatctgactcagcgcttgccggccgatgggcgcgacgag
gtgggtgacatcgcacgctcgtttaacaacttcggagagaaactgcaaagcgtaatgctg
cagattcgcgacgcaagcgaatcggtgcgcacggctgctaacgaaatcgcaaccgcaagc
cacgacctttcgtcccgtacagagtctgccgcggggagcctgcagcaaacggccgcatcg
atggatgaaattaccgggattgtagatcagtcaaccgcggcggcccgcgaggccgacgag
cgttcggccggcgctgcgaagatcgcttcgcatggtggccagttaatggctaatgtagtc
acgacaatggcgaggattgagaaagcgtccgaccggataggcgagatcatcggcgtgatc
gacggcattgccttccagactaatctcctcgcgctcaacgctgctgtcgaggccgcgcga
gcaggcgagcaaggccgtggctttgcagtcgtcgcgcaggaggtgcgcagcctcgcccag
cgcagcgcgcaggctgcgcgcgaagttaaggaactcgtcgagtctacggtagcaagcgtt
gcagcgggctcggtgcaggtgcgtcaggcgggtgagacgatgagcgagattgtcactaat
gtgacggaggtcaaaacgattatctcggggatcacgcgtgcggccaacgaacagacacgc
gggattcaggaagtcaatcgcgcggtcacacagctcgataggatggtgcagcagaacgca
gcgctcgtcgaacggtcggcagcggcagcaaccgtcttgcagactcaggctaactcgttg
gcatctaccatcgaacagttcaaggtcgcataa
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