Trinickia violacea: FAZ95_27365
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Entry
FAZ95_27365 CDS
T09503
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
tvl
Trinickia violacea
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvl03021
]
FAZ95_27365
Transcription machinery [BR:
tvl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FAZ95_27365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
SnoaL_2
HTH_23
HTH_17
Motif
Other DBs
NCBI-ProteinID:
QCP54862
UniProt:
A0A4P8IZQ2
LinkDB
All DBs
Position
2:complement(1174919..1175749)
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AA seq
276 aa
AA seq
DB search
MADLRPRLHRYCTRMVGSAFDGEDVVQDALASAIQAFPAAGEIQHPESWLLRIAHNAALD
ALRRRKRQGVTDSDEALSNLADPSAHADARVAAAASLANFLYLSTIQRSTVVLADVLGYS
LDETADILGVSLAAVKSALHRGRVRLQELVDTPDHSMPSLSEDDRERLTRYADRFNARDF
DALRDLLSEEVRLDLVNRIRLAGRKDVSIYFTRYEQNLDCRLAVGWAEGRPALLASDPNV
AARYVILLDWDGDRIAAIRDFRYAPYVAESLDVRSL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctgcgcccgcgcctgcatcgctactgcacgcgcatggtcggctcggcgttc
gacggcgaggacgtcgtgcaggacgcactcgcgagtgcgattcaggcgtttccagccgcc
ggcgagattcagcatccggaaagctggttgctgcgcatcgcccataacgcggcgctcgac
gcgctgcgccgccgcaaacgccaaggcgtgaccgactcggacgaggcgctgtcgaatctg
gccgatcccagcgcgcacgccgatgcgcgcgtcgcggccgcggcgagtctcgcgaacttt
ctgtatctgtcgacgatccagcgctcgaccgtcgtgctcgcggacgtgctcggctattcg
ctcgacgaaacggcggacatcctcggcgtcagtcttgcggccgtgaagtcggcgctgcac
cgcggccgtgtccggctccaggaactcgtcgatacgccggaccattcgatgccgagcctg
tccgaagacgatcgcgaacggctcactcgctacgccgatcgattcaacgctcgcgacttc
gatgcgctgcgcgacctgctctccgaggaagtgcggctcgacttggtcaaccggattcga
ctcgccggacgcaaggacgtctcgatctacttcacgcgctacgagcagaacctcgattgc
cggctcgccgtgggttgggcggagggacgccccgcactgctcgcgagcgatccgaacgtg
gcggcccgctatgtgatcctgctcgactgggacggcgatcgcatcgccgccattcgcgac
ttccgatacgcgccttacgtggcggagagcctggacgtgcgaagcctgtga
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