Trinickia violacea: FAZ95_28240
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Entry
FAZ95_28240 CDS
T09503
Name
(GenBank) TetR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
tvl
Trinickia violacea
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvl03000
]
FAZ95_28240
Transcription factors [BR:
tvl03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
FAZ95_28240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
HTH_32
HTH_22
DUF3670
HTH_11
HTH_36
Motif
Other DBs
NCBI-ProteinID:
QCP52991
UniProt:
A0A4P8IWY4
LinkDB
All DBs
Position
2:1373864..1374478
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AA seq
204 aa
AA seq
DB search
METTATPQRLTDRKRVAIIEAAIEEFRSAGFDATSMDRIAARASVSKRTVYNHFPSKEAL
FASILHQLWDASRTGSAPAYRADAPLRVQLLDLLMRKLRFMNDEAFLSLARVAIAAGIHS
PERARDMVARMGEREEDLMVWVRAAAADGRLKTSDPVFATHQLYGLVKAFSFWPQVTMGQ
PPLSKSEQKKVAEAAADMFLARYA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaccgccaccccccaacgcctgactgatcgaaagcgcgtcgccatcatcgag
gcggcgatcgaggaatttcgctcggccggcttcgacgcgaccagcatggaccgtatcgcc
gcgcgcgcgagcgtctccaagcgcaccgtctacaaccatttcccgagcaaggaggcgctg
ttcgcgtcgatcctgcaccagctgtgggatgcgagccggacgggcagtgcgcccgcctat
cgcgccgacgcgccgttgcgcgtgcagttgctcgacctgctgatgcgcaagctgcgtttc
atgaacgacgaagcgttcttgtcgctggcgcgcgtggcgatcgcggcgggcatccattcg
ccggagcgcgcgcgcgacatggtcgcgcgcatgggcgagcgcgaggaagacttgatggtg
tgggtacgtgcggccgcggccgatgggcgtctcaagacatcggacccggtattcgccacg
caccagttgtacgggctcgtgaaggcgttttcgttctggccgcaggtgacgatggggcag
ccgccgctcagcaaaagcgaacagaagaaagtggcggaagcggccgccgatatgtttctc
gcgcgctatgcgtga
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