Trinickia violacea: FAZ95_30185
Help
Entry
FAZ95_30185 CDS
T09503
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
tvl
Trinickia violacea
Pathway
tvl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FAZ95_30185 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvl02000
]
FAZ95_30185 (choW)
Transporters [BR:
tvl02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
FAZ95_30185 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DPM3
Motif
Other DBs
NCBI-ProteinID:
QCP53331
UniProt:
A0A4P8IXS8
LinkDB
All DBs
Position
2:1791626..1792534
Genome browser
AA seq
302 aa
AA seq
DB search
MSELIPLGSWVDHSVHFLLDHDSDTFDAIGKVIEGIAAFVEHSLQAVPMWALMAFFIGIG
LWRVGWRFAIFTTLALLLIYATGFWDQTVVTLGLTLSSTIISLVFGVPLGIWTAKNKHVA
AIVRPILDLMQTMPAFVYLIPAAMLFGLGRVPGILSTVIFAMPPAVRLTSLGIRHVNREI
VEAGQAFGCTSWQLLYKVQFPNALPSIMQGVNQTIMMALSMVIIASMVGAGGLGNDVLAS
IQRLDIGLGFESGLSVVLLAIILDRITESFGRTPGTAPAPRFAGLRHVMRVRRAQQQPLT
QS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaactcattccgctcggcagttgggtcgatcactcggtccacttcctgctcgat
cacgacagcgacacgttcgacgcgatcggcaaggtgatcgagggcatcgcggccttcgtc
gaacacagtttgcaggcggtgccgatgtgggcgctgatggcgtttttcatcggcatcggg
ttgtggcgcgtcggctggcgctttgcgatctttacgacgctcgcgctgctcttgatttat
gcgacgggcttctgggatcaaacggtcgttaccttgggcctcacgttgtcgtcgacgatc
atcagcctcgtcttcggcgtgccgcttggcatctggacggcgaagaacaagcatgtggcc
gcgatcgtccgtccgatactcgacttgatgcagacgatgcccgcgttcgtctatctgatt
ccggccgcgatgctgttcggtcttgggcgcgtgccggggattctgtcgaccgtgatcttc
gcgatgccgcccgccgtgcggctcacgagcctcggcattcgccacgtgaatcgcgagatc
gtcgaagcggggcaggcgttcggctgcacgtcatggcagctgctctacaaggtgcagttc
ccgaacgcgctgccgtcgatcatgcagggcgtgaaccagacgatcatgatggcgctgtcg
atggtgatcatcgcgtcgatggtgggcgcgggcggcctcggcaacgacgtgctggcgagc
attcagcggctcgatatcggactcggcttcgagagcggcctttcggtggtgctgctggcg
atcattctcgaccgcattaccgagagcttcggccgcacgccgggcacggcgccggcgcca
cgcttcgcagggctgcgccacgtgatgcgagtgcgccgcgcgcaacaacagccgctgacg
caaagctaa
DBGET
integrated database retrieval system
