Trinickia violacea: FAZ95_33570
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Entry
FAZ95_33570 CDS
T09503
Symbol
rhaS
Name
(GenBank) rhamnose ABC transporter substrate-binding protein
KO
K10559
rhamnose transport system substrate-binding protein
Organism
tvl
Trinickia violacea
Pathway
tvl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FAZ95_33570 (rhaS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvl02000
]
FAZ95_33570 (rhaS)
Transporters [BR:
tvl02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
FAZ95_33570 (rhaS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
QCP53925
UniProt:
A0A4P8J0R6
LinkDB
All DBs
Position
2:complement(2564874..2565902)
Genome browser
AA seq
342 aa
AA seq
DB search
MSGHHRFLRGFGMPLVCAALVAVTSVASAAASAADLKPGLKIAFVPKQINNPYEVTADNG
GMDAIKEFGGDGKVVGPSDAGASSQVSYINTLITQRQNAIVIAANDANALVPYLKRAMAQ
GVKVVTFDSDTAPAGRQLFVNQANAESIGRGQIQLLSKLIGGEGEFAILSATPNATNQNT
WIKWMQEELKKPEYAKMKLVKIAYGNDDDQKSFVETQGLLQAYPNLKGIVAPTSVGIAAA
ARYLSTSPKKGQVMLTGLGTPNQMRAFIKNGTVKAFQLWDPGQLGYLAAYAAANLASGTI
TGKEGESFDAGKLGKRTIGKDGEIILGPPTTFDTSNIDNFNF
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggcatcatcgttttctgcgcggtttcggcatgccgctagtctgtgcggccttg
gtggcggtgacatccgtggccagcgcggcggccagcgcggccgacctcaagcccggcctg
aaaatcgccttcgtgccgaagcagatcaataacccatacgaagtcaccgcggataacggc
ggcatggacgcgatcaaggagttcggcggcgacggcaaggtggtcgggccgtcggatgcg
ggcgcatcgtcgcaggtttcgtacatcaacacgctcatcacgcagcggcaaaacgcgatc
gtcatcgccgccaacgacgcgaacgcgctcgttccttatctgaagcgcgcgatggcgcaa
ggcgtcaaggtcgtgaccttcgattccgatacggcgccggccgggcggcagttgttcgtg
aatcaggcgaatgccgaatcgatcggccgcgggcagattcaattgctgtccaaattgatc
ggcggcgagggcgaattcgcgattctttcggcgacgccgaatgcgacgaatcagaatacc
tggattaagtggatgcaggaggaattgaagaaaccggaatacgcgaagatgaagctcgtt
aagatcgcttacggcaacgatgacgaccagaaatcgttcgtcgaaacgcaaggtctgctt
caggcttatccgaatttgaagggcatcgtggcgccgacttcggtgggcattgctgcggcg
gcgcgttatttgtcgacttcgcccaagaaaggccaggtcatgctgacgggtcttggcaca
ccgaaccagatgcgcgcgttcatcaagaacggcacggtcaaggcgtttcaattgtgggac
ccgggtcaattgggctatctggccgcttatgccgcggctaacttggcatcgggcacgatc
accggcaaggagggcgaatcgttcgacgccggcaagctcggcaagcggacgatcggcaag
gatggcgaaatcattcttgggccgccgaccacgttcgacacgagcaacatcgataatttc
aatttctaa
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integrated database retrieval system
