Trinickia violacea: FAZ95_34885
Help
Entry
FAZ95_34885 CDS
T09503
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
tvl
Trinickia violacea
Pathway
tvl02020
Two-component system
tvl02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FAZ95_34885
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FAZ95_34885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tvl02035
]
FAZ95_34885
Bacterial motility proteins [BR:
tvl02035
]
Flagellar system
Chemotaxis proteins
MCPs
FAZ95_34885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
dCache_1
HAMP
MCP-like_PDC_1
Motif
Other DBs
NCBI-ProteinID:
QCP54164
UniProt:
A0A4P8J305
LinkDB
All DBs
Position
2:complement(2861292..2863205)
Genome browser
AA seq
637 aa
AA seq
DB search
MKSLSSVGSRFTVAGCAALLVIALATFLMIRFFVEPDLATLESKLVQNQVGQISIAISDQ
LRRVEAQQRAITQTVALLGSDQIDQVLPGLIDQYGDTNVAGGGIWPLPNKREAGRDRFSS
FFVRNASTGKLEANTYWNQADSLKYWEQAWYENGTAALKGTCGWSKAFRDDASPQPRTAC
AMGIYKGNELYGVSTINVSLEFFNQLVADMERRIGAQILILEADGTIVSNSSKIRGDLVL
KRLSDLAPIAPMVVEIQRALSRDGQTMQARTAYDVDGEKRTLFMTAIPHSPWIIAASLPD
STLTVNSDRIVSRLAFVQIPMSIALLALMVLGIRMLMHRVNELKSNIDELASGEADLTRR
LEETGGQEFAAVARSFNVFIERLQGLVRNVATNAAQLQSASHEIATGNRDLSARTGAQAA
SLQETAAFMEELTATVKQNAESADGAHRLATEAFRAAERGGEVIAQFVSTMDSIDQSSRK
VVAITGTIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRAAASAKEIKAL
ISNAANNVQAGNALVQQAGEAMGEIIQSTTGAATIMTEVMEASKEQSRGIEQVSKAVTQL
DTVTQQNATLVEQVAASAQSLQDYAVTLSAEVSGFKA
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctctgtcgtctgtcgggtcccggtttacggtggcgggatgtgcggcgctcttg
gtgattgccttggctacttttttaatgatccggttcttcgtcgagccagatctggcaacg
ctggagagcaaactggtccaaaaccaggttggccagatttcaattgccatcagtgatcag
ctaagaagggtggaggcgcagcaacgcgctatcacacagacagttgcgctgctgggcagc
gaccagatcgatcaggtactgccgggactgatcgaccagtacggcgacacaaacgtggca
ggcggaggcatttggcctctgcctaacaagcgggaagcgggccgtgaccgattcagcagt
ttcttcgtccgaaatgcgtcgactggaaaactggaggcaaatacgtattggaatcaggct
gactcgttgaagtattgggagcaggcatggtatgaaaacggcaccgcggcgctgaagggc
acatgcggctggtccaaggcgttccgtgatgatgcgagcccacagccgcggactgcatgc
gcgatgggtatttacaaaggaaatgagctttacggcgtgtcaaccatcaacgtttcgcta
gaattttttaaccagttggtggccgatatggaacgccgaatcggcgcacagatcctgatc
ctcgaggcggacggcacgattgtcagcaacagcagcaagatccggggcgatctcgtactc
aagcgtctcagcgatctcgccccgatcgcgccgatggtagttgagattcaacgcgcgctg
tcgcgtgacggacaaacgatgcaggctcggactgcatacgacgtagacggagagaagcgc
accctgttcatgaccgcgattcctcacagtccgtggattattgccgccagcctgcctgat
tcgacgcttacggtaaacagcgaccgcattgttagtcgtctcgcgtttgtgcagatcccg
atgagcatcgcgcttctggctctcatggttttgggcatacgaatgctcatgcaccgggtg
aacgagctcaaatccaacatcgatgagcttgcgtcaggagaggccgacctcacaaggcgg
cttgaagaaacagggggacaggaattcgcagcagtcgcgcgcagtttcaatgtgttcatc
gaaaggctgcagggactggtgcgcaacgtcgcaacgaacgcggcccagctccaatcagcc
tcacacgagattgcgacgggtaaccgtgacctttcggctcggacgggagcgcaggctgct
tccctgcaggaaaccgcggccttcatggaagagttgacggcgactgtcaaacaaaatgcg
gaaagcgcggacggcgctcacaggcttgcgacggaagcgtttcgtgctgccgaacggggt
ggagaagtgatcgcgcagttcgtatcgaccatggactccatcgatcagtcctcgcgaaag
gtcgtagcaattacaggcacgatcgacggcatcgcctttcagacaaacattctggcgctc
aacgccgcagtggaagctgctcgtgcaggtgagcagggtcgaggctttgcggtcgtggcg
gctgaggtgcgcagtttggcgcagcgcgcggcggcgtcagccaaggagatcaaggcgttg
atctcaaacgcggcgaacaatgtgcaggcgggcaatgcgctggtccagcaagccggcgag
gcaatgggagaaataatccagtcgacgacaggtgcggcgaccatcatgacggaggtgatg
gaggccagtaaggagcagagcagggggatcgagcaggtcagcaaagcggtcacccagctc
gatacggttacccagcagaatgccacgctcgtagagcaggtagccgcttccgcccagtca
ttgcaggactatgccgtcaccttgtccgcggaggtgagcgggttcaaggcgtag
DBGET
integrated database retrieval system
