Trinickia violacea: FAZ95_36110
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Entry
FAZ95_36110 CDS
T09503
Name
(GenBank) type IV secretion protein Rhs
Organism
tvl
Trinickia violacea
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
PAAR_motif
Motif
Other DBs
NCBI-ProteinID:
QCP54368
UniProt:
A0A4P8IY69
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Position
2:complement(3126499..3130917)
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AA seq
1472 aa
AA seq
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MGDLWAAREGDALLHTSPWADLVGGVLEVAANIAVQWAATALVAAAIGVEVASLSCGTIL
AIGLVVAAGLVATGLGDRISGWCQDIGNALFPPTVQAHIATGSKDTRINGKPAARAAGIL
LTEDQIAALEKAAQDAPPKEQSIIDIAGAWLQWGKEFVSQMVQPTVASPEPAIPCDEDKI
LCDKHPSPVPKEYLAEGVKRVTINAQPAGRSGARSTCEAKIVDAPANGADVSPDVRIGGP
LAVVREIRSGKEPVALAIGIVMAFMGKGNMLSKAGCFLVGLGLNLITQKAGEALRSMWQR
ASNAVSQPVNAATGAKYLAGDEDRDFSLPGRFPLVWQRVYNSQDTRMEGLFGAGWSVPLE
VSVERTPGASDPDRWTYIDETGRRLDMQPVRSGEGFRSPGEGLGVRRSDAGQWLVESDDG
VYRVFAPDPRDAGRQRLVLLGDRNRNALRLHYDDDGRIVRIMDNPQTLCVLLHYDERTHR
RRVARIERRYGESLRDTVVLAQYRYDAAGDLAEVLDAAGHTLRQFAYDKGRRMVMHRLRA
GLVCHYRWGHFVGPTGEEWRVTEHWTDSGDHYWLDHDPVARRLTVSDSLGRTSRHEWNAQ
YQVTRYEDELGQVSCFEWNDERQLVSMTDAQGGVWRWSYDDAGRLASSTDPLGRVTQTQW
HPAWSLPLMELDAAGQPWRYVYDDRGNSVMEIDPLMQRTVIRYDAWGQPVQITDARGGNR
VLQWTNDGQLARHTDCSGSQTSFYYDNRGLLECVTDAEGNSSRYRYDALGRLSRVIRADG
SEDRFTLDASGQLVARTDALAKSTRYTRDAHGRVVERIDAAGHCVRFEYDAYGRLNALVN
ANGERYGFGYDVCDRVVEQIGLDGLCQQTDYDALGQTIATRWVVGTMAQMEHRYVRDAVG
RLTRRVTSQDVTDYRHDVADNLLEIRRTLPADGERDPEGKAEVISFAYDALGQLLEETTS
HGTLLHAYDELGNRTSTMLPDGSTVNLLYYGSGHLHQINVDGQTVSDIERDRLHREVLRS
QGRLSTRSLYDARGRVSRRQSYREMRGIVPDSVIDRRYGYDGLSRLVNKHHTLQGQTAFG
YDGEGLITECRNDGYYGTWRYDAAANLLDETQRGGERSNVIRFNRVLAMRGRRYSYDAYG
RMSHRDTVDGMQRYRYDAHHRLVEARVERTGLPERRYGYEYDALGRRTAKYQIDADGQRH
SYVRFLWDGMRLCQEMRLNGSVSVYLYNGVGSYEPLARLDAEGDSSKRNTLYYHTDVNGA
PEELTDASGEIVWRTQYQIWGNTVVETAVEEYRPQQNLRYQGQYLDRETGLHYNLFRYYD
PDMGRFITPDPIGLAGGLNLYQYAPNPISWIDPWGLETCRLTAKQKRAMGPAPAGMKDPH
YHHIVRENAPSNWNATSRQHILDSQSILDKHGIGLNDDARNFTWAQNGGGNHTQAAAEKV
FNTLSAADASGGKPAVESALKNMGEQMKQGTF
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atgggagatctatgggctgcccgcgagggcgatgcattgctgcatacgtcgccgtgggcc
gatctcgttggaggcgtgctggaggtggccgccaatatcgccgtccagtgggcggccaca
gcgctggtcgcagctgctatcggtgtggaagtcgcttcgttgagctgtggaaccattctg
gcaattggcctcgtagtggcggccgggctggtagcgacaggactcggagaccgtatatcg
ggctggtgtcaggatatcggcaacgcgctgttcccacctaccgtccaggcgcacatcgct
accggatcgaaagatacacgtatcaatggcaagcctgccgcgcgcgctgcaggtatcctg
ctgaccgaagaccagattgcggcgcttgagaaggcggcgcaagacgctcctccaaaggag
caatcgatcatcgatattgctggcgcctggctgcagtgggggaaggagttcgtttcgcag
atggtgcaaccaacggtggccagcccggaacccgccattccgtgcgatgaggacaagatc
ctctgtgacaagcatccctcgcccgtaccaaaggaatatctcgcggaaggcgtgaagcgc
gtcacgatcaacgctcagccggcaggcagaagcggtgcgcgtagcacctgcgaagcaaag
attgtcgacgcaccagcgaacggtgccgatgtctcgccagacgtgcgcattggcggcccg
ctggccgtggtacgcgaaatccgcagtggcaaggagcccgttgcgctcgcgatcggcatc
gtcatggcattcatgggtaagggcaacatgctgtccaaagcaggctgtttcctggtcggc
cttggcctgaatctcatcacccagaaggctggtgaggcactgcgttcgatgtggcagcgt
gcgagcaacgcggtaagccagccggtcaatgccgcaacgggcgccaaatacctggctggt
gacgaagaccgcgacttctcgctcccaggccgttttccgctcgtctggcaacgcgtatac
aacagccaggacactcgcatggaaggcctgttcggcgcgggctggagcgtgccactggag
gtatcggtcgaacgcacgccgggggcgtccgatcccgaccgctggacttacatcgacgaa
acgggccgccgtctcgatatgcagccggttcgctccggtgaagggttccgcagcccaggt
gaaggcctcggcgtacgccgtagcgacgccgggcagtggctagtcgagagcgacgacggg
gtataccgcgtcttcgcgccggacccgcgggacgccgggcggcaacgccttgtcctgctc
ggcgaccgcaaccgcaacgcgttgcggctgcattatgacgatgacggtcgtattgtccgc
atcatggacaacccgcagactctctgcgtgctgttgcactacgatgagcggactcatcgg
cgccgggtggcccgcatcgagcgtcgctacggtgaatccctgcgcgataccgtagtactt
gcccaataccggtacgacgcagccggtgatctcgcggaggtgcttgacgcagcagggcac
accttgcgccagttcgcctacgacaagggccgccgcatggtgatgcatcgcctgcgtgcg
ggtctggtctgccattaccggtggggacactttgtgggccccaccggcgaggaatggcgt
gtcaccgagcactggaccgacagtggcgatcactactggctcgaccatgatcccgtcgca
cgccgtctgacggtaagcgacagtctgggccggaccagtagacacgagtggaacgcacag
tatcaagtgacgcgttacgaggacgagctcggtcaggtgtcgtgcttcgaatggaatgac
gagcgtcagttggtctcgatgaccgatgcacagggcggcgtgtggcgatggagctacgat
gacgctggccggctggcgtcgagcaccgatccgctggggcgcgtcacgcagacccaatgg
caccctgcgtggtcgctgccgttgatggagcttgatgcggccggtcagccgtggcggtac
gtgtacgacgatcgcggcaacagcgtaatggaaatcgatccgctgatgcagcgtaccgtt
atccggtatgacgcgtggggccagcctgtgcagatcacggacgcgcgcggcggcaaccgt
gttctgcaatggacgaatgatgggcaactggcgcggcacacggactgttcaggctcgcag
acttcgttctattacgacaaccggggcttgctggagtgtgtgactgatgccgaaggcaac
agcagtcgctaccgctatgacgcgttgggccggctttcccgcgtgatccgtgcagacgga
tcagaggatcgcttcactctcgatgcctctgggcaactggtagcacgcacagacgcgctg
gcaaaaagcacgcgctatacgcgcgacgcacacgggcgggtcgtcgagcggatcgatgcg
gcgggccactgcgtacggttcgaatacgacgcctatgggcgactgaatgcactcgtcaac
gcgaacggtgagcgctacggatttggctacgatgtgtgcgaccgcgtcgtggaacagatc
ggcctggacgggctatgtcagcagacagattatgatgcgcttggccaaaccattgccact
cgctgggtagtcggcacgatggcgcaaatggaacatcgctatgtgcgtgatgcggtggga
cggctcacccgtcgcgtgacctcgcaggacgtcacggattatcgccacgatgtggctgac
aacctgctcgagatccggcgtacgcttcccgcggatggtgaacgagatccggaaggcaaa
gctgaagttatctcgtttgcctatgatgcgcttggacaactgctggaagaaacgacctcg
catggcaccctgttgcatgcctatgacgaactgggtaatcgcacctcgaccatgctgccc
gatggcagtacggtcaacctgctctactatggcagcggccacctgcaccagataaacgtt
gatggccagacggtcagcgacatcgaacgcgaccgcctgcatcgggaggtgctgcgcagc
cagggacgactttcgacccgaagcctgtacgacgcgcgcggtcgcgtttcgcggcggcag
agctaccgggaaatgcgtgggatcgtcccggatagcgtgatcgaccgtcgctatggctac
gatggcctgtcacgcctggtgaacaagcatcatacgttgcagggacaaacagcgtttggc
tacgacggggaaggtctgatcacggagtgtcgcaacgatggctactatggcacatggcgg
tacgacgcggcggccaatctgctagacgagacacagcgcggtggagagcgcagcaacgtg
atccggttcaatcgcgtgctggcaatgcgcggccggcgttactcctatgatgcgtacgga
cggatgtcgcatcgtgataccgtcgatggcatgcagcgttaccggtacgatgcacatcac
cgcctggtcgaggcgcgtgtagagcgtacggggctgcctgagcgacgatacggctacgaa
tatgacgcactggggcgacgcacagcaaagtaccaaatcgacgcggatggtcagcggcac
tcatacgtgcggttcctgtgggacgggatgcgcctgtgtcaggagatgcgcctgaacggc
agcgtcagtgtgtatctgtacaatggcgtgggcagctacgagccgttggcgcggctggat
gcggagggagattcgtccaaacgcaatacgttgtactaccatacggatgtcaacggcgcg
cctgaggaactgacggacgcaagcggcgagatcgtgtggcgcacgcagtaccagatatgg
ggtaacacggtcgtcgaaacggcggtcgaggaataccggccgcagcagaatctgagatac
caggggcagtatcttgaccgagagacgggtttgcactacaacctgttccggtactatgat
ccagacatggggcgcttcatcacgcccgatccgattgggctcgcaggcggattgaacctt
tatcaatacgcgcccaacccgatcagctggatcgatccgtggggcttggaaacatgtcgc
ctcaccgccaagcagaagcgcgcaatgggaccagctccggctgggatgaaggatccgcac
tatcaccacattgtgcgcgagaacgcgccaagtaactggaacgctaccagccgtcagcac
atccttgattcgcagtccattcttgacaagcatggcatcggactgaacgacgatgcacgg
aacttcacctgggcgcagaacggtggagggaaccacactcaggcggccgccgaaaaggtt
ttcaacaccttaagcgcagcggatgcctctggagggaagcccgccgtagaatccgccctc
aaaaatatgggcgaacagatgaagcaagggactttctaa
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