KEGG   Trinickia violacea: FAZ95_36170
Entry
FAZ95_36170       CDS       T09503                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
tvl  Trinickia violacea
Pathway
tvl03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tvl00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FAZ95_36170 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tvl02044]
    FAZ95_36170 (tssH)
Secretion system [BR:tvl02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FAZ95_36170 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 Sigma54_activat AAA_7 nSTAND3 Zeta_toxin NACHT IstB_IS21 TniB AAA_25 AAA_29 AAA_18 AAA_14 T2SSE CbiA AAA_24 Clp_N NBD_SMAX1 Hpr_kinase_C AAA_6
Other DBs
NCBI-ProteinID: QCP54378
UniProt: A0A4P8IY79
LinkDB
Position
2:3143242..3145962
AA seq 906 aa
MTISRQSLFGKLGATLFRSAESATAYCKLRGNPYVELVHWLHQLLQQPDSDVHRVLRHCR
IERDPLDRDMTRALAVLPAGASSIIDFSHHIDTAIERAWVITTLVIKEQRIRSAWLLVAL
VTTPELRRVLLSISPVFAKIPVEGLADALPAWIDGSPEAGEAPHDNSDYSATLPGEASQA
IPGASKGSTLEQFCTDLTARAHAGEIDPVVGRELEIRTMIDVLLRRRQNNPLLTGDAGVG
KTAIVEGLALAIANGEVPPKLASVRLLGLDVGALLAGASMKGEFEARLKGVLEAAAKSPV
PVILFVDEIHTLIGAGGQSGTGDAANLLKPALARGTIRTIGATTWAEYKRHIEKDPALTR
RFQVLQVPEPEELAAIDMVRGLAQTFARHHGVIVLDEAIRAAVTLSHRYIPSRQLPDKAI
SLLDTACARVALSQHSPPRELQDLSGRLRAAGVERDLLQQEALIGLDAGQAISLANRRID
TLTRDLTAVEGQWRFQFDAMQMLASAREAAMSGDQQSAGSLRALEARLSALRGDTPYVFP
EVDEAIVAEIVSDWTGIPVGRMVTDEVAAVRTLPATLEARVIGQPDALHQIGERVQTARA
GLTDPKKPLGVFLLAGPSGVGKTETALALAEALYGGEQNLITINMSEYQEAHTVSGLKGA
PPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHRDIHEMFFQVFDKGYMEDGDGRHIDF
RNTTILLTSNVGFELTASLCADPALAPDAQGLHDALTPELLKVFPAAFLGRVTVVPYRPL
ASMSLARIVRLHLDRVVHRMAETHGIALTYVEAVVDYIVGRCLVQETGARVLIGFIEQHV
LPRLSALWLDAFSSKQTLSRMEIVLGDGDAPPAIALLFRFTAGEQSSQTDGTKADTEALL
TVGQAR
NT seq 2721 nt   +upstreamnt  +downstreamnt
atgacgatttcccgtcagtcactgttcggcaagcttggcgccacactgttcaggagtgct
gagtcagcgacggcgtactgtaaactcaggggcaatccgtacgtcgaactggtgcactgg
ctacaccagctcctgcagcaacccgattccgatgtgcatcgtgtgctgcggcattgcagg
attgagcgggacccactggatcgcgacatgacgcgcgcacttgcggtgctgccagcaggc
gcaagctccatcatcgatttctcgcaccacatcgataccgcgatcgagcgggcctgggtc
atcacgacgctggtgatcaaggaacagcgcattcgcagcgcgtggctgctggtggccctt
gtgacgacgcccgaactgcggcgtgttctgctctcgatttcacctgtctttgcaaagatc
cctgttgaggggctggctgacgcgttgccggcatggattgacgggtcgcccgaggcgggc
gaagcgccgcacgacaatagcgactactccgccacccttccgggtgaggcgtcccaggcc
attccgggtgcatcgaaaggctcgacgctggaacaattctgcacggacctgactgcacgt
gcacatgcgggtgaaatcgatcccgtggtggggcgcgagctcgaaatccggacaatgatc
gacgtgcttctgcgccgccggcaaaacaatccactgctcacgggtgacgccggcgttggc
aagacggccattgttgaagggcttgcacttgcaatcgccaacggcgaagtgccgcccaaa
ctagccagcgtgcggctgcttggtctcgatgtcggtgccctccttgctggtgcgagcatg
aagggcgagttcgaggcacgcctgaagggtgtgctggaagctgctgcaaaatcgccggtc
ccggtcatccttttcgttgacgaaatccatacgttgatcggcgcaggtgggcagtcagga
actggcgatgcagccaacctgcttaagccggcgcttgcccgtggcacgatccgcaccatt
ggcgcgacgacgtgggccgagtacaagcggcacatcgagaaggatccggcgttgacgcgc
cgcttccaggtgctgcaggtaccggagccggaagaactggcggcaattgacatggtgcgg
ggcctcgcgcaaacgttcgcgcgacatcacggtgtcatcgtgctcgacgaggccatccgc
gccgcggtgaccctttcccatcgctacattccctcgcgacagctgcctgacaaggcaatc
agcctgctcgacacggcctgtgcgcgtgtggcgctctcgcagcactcgccgccgcgtgaa
ctgcaggatctttccgggcgtctgcgcgccgccggtgtcgagcgcgacctgctccagcag
gaagcgctcatcggtctggacgccggacaggccatctccctggcgaaccggcgcatcgat
acacttacccgcgacttgactgccgtcgaaggtcaatggcgtttccagttcgacgccatg
cagatgctggccagtgcgcgtgaagcggccatgtccggcgatcagcagtcagctggctca
ttgcgcgcgcttgaggcgcgcctctcagcgctgcggggtgataccccctacgtgtttccc
gaggtcgacgaagccattgtggcggagatcgtgtcggactggaccggcattccggtggga
cgcatggtgactgatgaagtcgcagctgttcgcacgctacccgcaacgctcgaggcgcgg
gtcattggccagcccgatgcgctgcaccagatcggcgagcgcgtgcagacggcacgtgcc
ggtctcacggacccgaagaagccactgggcgtgttcctgcttgcgggcccctccggcgtc
ggcaagaccgagactgcgctggcccttgccgaagcgctgtatggcggtgaacagaacctg
atcaccatcaacatgagcgagtatcaggaggcccacaccgtctctggcctcaagggtgcg
ccaccgggctatgtgggttacggcgagggcggcgtgctgaccgaggccgtgcgccgccgc
ccctattcggtggtactcctcgacgagatcgaaaaggcgcatcgcgacatccacgagatg
ttcttccaggttttcgacaagggctacatggaagacggtgacggtcggcatatcgacttt
cgcaataccacaatcctgctcacaagcaacgtgggcttcgagctgactgccagcctgtgt
gccgacccggcgctcgcgccggacgcgcagggactgcacgatgcactcacgcctgagttg
ctcaaggtgtttccggcagcgtttcttggccgcgtcaccgttgtgccgtaccggccgctc
gccagcatgtcactggcacgcatcgtccgtctgcatctggatcgcgtcgtgcaccgcatg
gctgaaacgcacgggatcgcactgacctatgtcgaagctgtcgtcgattacatcgtcggg
cgatgcctcgtgcaggaaacgggagcccgcgtgctgatcggcttcatcgagcagcatgtc
ctgcctcgcctgtcggccctgtggctcgatgcattttcgtcgaagcagaccctgtcgcgc
atggagattgtcctgggcgatggtgatgcgccaccggccatcgcgctgttgttcaggttc
acggcgggggagcagtccagccagaccgatggcactaaagccgacaccgaagcacttctt
acggtcggacaggcccgctga

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