Thermostichus vulcanus: NIES2134_103860
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Entry
NIES2134_103860 CDS
T05980
Symbol
clpC
Name
(GenBank) ATP-dependent Clp protease regulatory subunit
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
tvn
Thermostichus vulcanus
Brite
KEGG Orthology (KO) [BR:
tvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tvn03110
]
NIES2134_103860 (clpC)
Chaperones and folding catalysts [BR:
tvn03110
]
Heat shock proteins
HSP100
NIES2134_103860 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
TniB
UVR
AAA_14
AAA_18
AAA_28
Zeta_toxin
Mg_chelatase
IstB_IS21
TsaE
ResIII
AAA_25
NACHT
ATPase_2
AAA_23
IBN_N
DNA_pol3_delta2
Torsin
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
BAY52013
LinkDB
All DBs
Position
397777..400251
Genome browser
AA seq
824 aa
AA seq
DB search
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLRSMGVNLKDAR
IEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA
ARVLENLGVDLSKVRTQVIRMLGETAEVTAGASQGRTKTPTLDEFGVNLTQLAIEGKLDP
VVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEDKRVVT
LDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILK
PALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEKH
HKLKISDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDRELR
QVLKEKDDAVRAQNFDKAGELRDREMELKAQIRAIAQQKKAEIANGEEETPVVTEEDIAH
IVASWTGVPVSKLTESESEKLLHMEETLHQRVIGQDEAVKAISRAIRRARVGLKNPNRPI
ASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNE
GGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLLIMTS
NIGSKVIEKGAAGLGFEFGTEDAAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQL
TKDEVKQIADILLKEVFSRLTEKGITLEVTERFKERLIDEGYNPSYGARPLRRAIMRLLE
DTLAEEMLSGRIREGDTALIDVDESGQVKIQAQPRRELLPQAVE
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacgctttacagaaaaagccattaaagtcatcatgctggcacaggaagaggct
cgccgcctcggccacaactttgtcggtactgaacaaattctcctcggactgattggtgaa
ggtaccggtgtggccgccaaggttctacgttctatgggcgtgaacctcaaggatgcccgc
atcgaagtggaaaaaattattggccgtggatctggttttgtcgcggtggagattcccttt
accccccgtgccaagcgagtgttagaactctcccttgaagaagctcgtcaactgggtcac
aactacattggtactgaacacctcctgctgggactgatccgcgaaggggaaggggtggcc
gcccgcgtccttgaaaatttgggtgttgatctatcgaaagtgcgcacccaagtcattcgg
atgctgggtgaaaccgcagaagtgaccgctggcgctagccaaggacgtaccaaaacgccg
acgctggacgaatttggtgtcaacctcacccagctggctattgagggcaagctagatccc
gtggtgggtcggcaaaaagaaattgagcgggtgattcaaattctgggccgtcgcaccaaa
aataaccccgtgctgatcggtgaaccgggggtgggtaaaaccgcgattgctgaaggcctg
gcccagcgcattgccaacaaagatgttcccgacattcttgaagacaagcgggtggtcacc
ctcgatatcggcctcttggtggcaggcacgaagtaccggggtgaatttgaagagcggctg
aaaaagatcatggatgaaatccgccaagccggtaacgtgatcttggtgattgacgaggtg
cacacgttaattggggctggggcggcggagggtgctattgatgcagccaatatcctcaaa
cccgccctggctcgtggggagttgcagtgcattggtgccactactttggatgagtaccgc
aaacacattgagcgggatgccgccttggagcggcgcttccaaccggtgatggtgggtgag
ccctccgttgaggaaaccattgagatcctctacggcctgcgggaacgctatgagaagcac
cacaaactgaaaatttccgatgaagcccttgaggcggcagcgaagctgtccgatcgctac
attagcgatcgctatctaccggacaaggccattgacctcattgacgaagcaggctcacgg
gtgcgcctgattaactcgcaactaccccctgcggccaaggaactggatcgcgaattgcgg
caagtgctcaaagaaaaagacgatgccgtgcgggcccaaaactttgacaaagcgggtgaa
ctgcgcgatcgcgagatggaactgaaagcacaaatccgtgccattgcccagcagaaaaaa
gccgaaatcgccaacggtgaagaggagacccccgttgtcaccgaagaggacattgcccac
attgtcgcctcgtggacgggtgtacccgttagcaagctcaccgaaagcgagtcggaaaaa
ctgctgcacatggaggagaccttgcaccagcgggtgattggccaagatgaagcggtgaaa
gcgatctcccgcgccattcgccgtgcccgtgtcggtctcaaaaatcccaatcgtcccatt
gccagctttatcttctcggggccaaccggtgtcggtaaaaccgagttaacaaaagccttg
gcggcctacttctttggctcggaagaggcgatgatccgcttggatatgtccgaatacatg
gagcggcataccgtctccaagctcatcggttcgccccccggctatgttggctacaacgag
ggcggtcagctcactgaagccgtgcggcggcgtccctatacggtggtgctcttcgatgaa
atcgagaaagctcaccccgatgtctttaacctgctactgcaaatccttgaggatggccgt
cttactgactccaagggacgtaccgttgacttcaagaataccctcttgatcatgacctcg
aacattggctccaaggtgattgagaagggggcggcgggccttggctttgagtttggcact
gaggatgccgccgaatcccaatacaatcgcattcgctccttggtgaatgaggaactgaag
caatacttccgccctgaattcctcaaccgccttgatgagattattgtcttccgtcaattg
acgaaggacgaagtcaagcaaattgccgacattctccttaaggaagtgttctcgcgcctc
acagaaaaaggcatcaccttggaggtgaccgaacgcttcaaggaacggctcattgatgag
ggctacaaccccagctatggagcgcggcccctgcggcgggcaattatgcgccttttggag
gacaccttggctgaggaaatgctctctggccgcatccgcgaaggcgacactgctctcatt
gatgtggatgaatccggtcaagtgaagatccaagctcaacctcggcgtgagctattgccc
caggcggttgagtag
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