Thermostichus vulcanus: NIES2134_110880
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Entry
NIES2134_110880 CDS
T05980
Symbol
sigB
Name
(GenBank) group 2 RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
tvn
Thermostichus vulcanus
Brite
KEGG Orthology (KO) [BR:
tvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvn03021
]
NIES2134_110880 (sigB)
Transcription machinery [BR:
tvn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NIES2134_110880 (sigB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
DUF2316
Motif
Other DBs
NCBI-ProteinID:
BAY51324
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All DBs
Position
1102396..1103379
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AA seq
327 aa
AA seq
DB search
MMNSASKNASPTPTVSTDMVRTYLQEIGRVPLLTHEQEIILGKQVQQMMALREKRDALTK
ELGREATFEEWAAACNLTPTELCNILKRGERAKQKMIEANLRLVVSVAKKYQKRNLELLD
LVQEGTLGLERGVEKFDPTRGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKI
KRTQRELAQKLGRSATPAEVAKALELEPEQIREYLTLARQPVSLDLRVGDNQDTELGELL
EDDSLSPEQFTTVESLRDDVNLWLAELTPQQRQVLTLRYGLGDGQELSLAKVGEQLNLSR
ERVRQLERQALDHLRRRRQQMYEYLAS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgatgaactccgcttctaaaaatgcatcccctacacccaccgttagcaccgacatggtg
cgcacctacctccaggaaattgggcgcgtgccgctgctgacccatgaacaggaaattatt
ctcggtaaacaggtgcagcaaatgatggcactgcgggaaaaacgcgatgccttaaccaaa
gaactcggacgtgaagccacttttgaagaatgggcagcggcctgtaatctgacgcctacg
gaattgtgcaatatcctcaagcgcggtgaacgcgccaagcaaaaaatgattgaagccaac
ctacggctcgtggtttcggtggccaagaagtatcaaaaacgtaatcttgagttgctggac
ttggtgcaagagggcaccctgggcctcgaacgcggtgtggaaaagtttgatcccacgcgg
ggctacaagttctctacctatgcctactggtggattcgtcaggcaattacacgggcgatc
gcccaacaggcgcggaccattcggctacccatccatatcactgagaagctcaacaagatc
aaacgcacccaacgggaactggcgcaaaagctgggacggagtgccacgcctgctgaggtg
gccaaggctctagaactcgaacccgagcaaattcgggaatacctgaccctagctcgccaa
ccggtttcccttgatctacgtgtgggggacaatcaggacactgaactcggtgaactgctc
gaggatgacagtctttcgccagagcaatttaccacagtggaatccctgcgggatgatgtc
aacctgtggctggcggaactgacgccccaacaacggcaagtcctcaccctgcgctacggg
ttgggggatggccaagaactgtccctcgccaaggtgggtgagcagctcaaccttagccgt
gaacgggtgcggcaactggagcggcaagcccttgatcatctgcggcggcggcgccagcaa
atgtatgaatacttggccagctaa
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