Thermostichus vulcanus: NIES2134_115260
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Entry
NIES2134_115260 CDS
T05980
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tvn
Thermostichus vulcanus
Brite
KEGG Orthology (KO) [BR:
tvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tvn03016
]
NIES2134_115260
Enzymes [BR:
tvn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NIES2134_115260
Transfer RNA biogenesis [BR:
tvn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NIES2134_115260
Prokaryotic type
NIES2134_115260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BAY50894
LinkDB
All DBs
Position
complement(1559793..1560656)
Genome browser
AA seq
287 aa
AA seq
DB search
MFGFLNLNKPAGCTSHDCINELRRRLRLKRIGHGGTLDPMATGVLPIALGAATRLLPYLS
DRKAYIGTVRFGMSTTTDDITGEICQEQGASHLTLAAIQEQLPQFIGEIEQLPPAYSAIQ
VAGQRLYARARAGEVVSVPPRIVTVYRIEVLHWQPGRYPELTLHITCGSGTYIRALARDL
GTALGVGGTLAALQRIESGGLRIEESHSLESIAPEHLPLCSPQEVLSHLPWLELNAAQLN
DWYHGRAVICEGLPPADSCVGVSFATACVGVGISGGDRLHPKVVLKE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttttttgaatctgaataaacctgctggctgcacgtcccacgactgtattaat
gaactgcggcggcggctgcggctcaaacggattggccatgggggcacattggatccgatg
gccacaggggtactgccgatcgcccttggggcggcaacgcgacttttgccctatctcagc
gatcgcaaggcctacattggcacggtgcgctttggcatgagcaccaccaccgatgacatc
acaggggaaatttgccaagaacagggggccagtcatctgacgcttgcagccatccaagaa
cagctcccgcaatttattggtgagattgagcaattgccccctgcctacagtgcgattcaa
gtggctggccagcggctctatgcccgtgcccgggcgggtgaggtcgtcagcgttccaccg
cggatcgtgacggtgtaccgtatcgaggtgttgcattggcaaccgggtcgttatcctgaa
ctcaccctgcacattacctgtggcagtggtacctatattcgcgcccttgcccgcgatttg
gggactgcactgggggtcggcggcaccctagccgccctgcaacggattgaaagtggtggc
ctgcggattgaggagagccattccctagaaagcattgccccagaacatttacccctgtgc
tcgccccaagaggtgctctcccatctgccgtggctggaactcaatgccgcacaactcaac
gactggtaccatggccgcgccgtgatttgtgaggggctgccgccggcggacagttgcgtg
ggcgtcagctttgccactgcctgtgtcggcgttggcatcagtggcggtgatcgcctgcat
cccaaggtagtgctcaaggagtag
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