Thermostichus vulcanus: NIES2134_116820
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Entry
NIES2134_116820 CDS
T05980
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tvn
Thermostichus vulcanus
Pathway
tvn00300
Lysine biosynthesis
tvn00470
D-Amino acid metabolism
tvn01100
Metabolic pathways
tvn01110
Biosynthesis of secondary metabolites
tvn01120
Microbial metabolism in diverse environments
tvn01230
Biosynthesis of amino acids
Module
tvn_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tvn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NIES2134_116820 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NIES2134_116820 (lysA)
Enzymes [BR:
tvn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NIES2134_116820 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAY50743
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Position
1718783..1720135
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AA seq
450 aa
AA seq
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MISTSLAANQQILPLTAQTNARGHLTIGGCDVVELVAQFGSPLYILDEFTFRTACRQYQE
TLQQAYGGESLVLYASKAWNCLATCALAHSEGLGIDVASGGELYTALSAGVPASHIYFHG
NNKSPQELLYALEVNCTIVADNWLELERLAAYVEEHDLSTPPRVMLRLTPGIECHTHEYI
RTGHLDSKFGFDPQQFPELLQFAKAHPELDWVGLHAHIGSQIFEEQPHLDLCDVLVDWLA
QARAAMLPMRELNVGGGLGIRYVESDNPPAIAHWTKAISHQLSQACQQRHLPLPKLICEP
GRSIVGPAAVTAYTVGSRKVIPELRTYIAVDGGMSDNPRPMTYQAQYTALCANRMTTAAT
ETVRVAGKHCESGDILLAHATLPPLQANDILVVASTGAYNYSMASNYNRVPRPAAVIVCD
GEANLILQRETYADLVAHDVLPLRLSTPTP
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgatctccacctctcttgctgccaatcaacaaattttacctttgactgcgcaaaccaat
gcccgcggccatctcaccattggcgggtgtgatgtggtggagttagtggcccagtttggc
tctcccctctacattcttgatgaattcacctttcgcaccgcttgccgtcagtatcaagaa
acgctccagcaggcctatggcggtgaatctttggtgctgtatgcctcaaaggcttggaac
tgcttggccacctgcgcccttgcccacagtgaaggtttaggaattgacgtcgcctcaggg
ggcgagctctatactgccttgagtgccggcgtccctgccagccatatttacttccacggc
aataacaagtccccccaagaactcctctatgcccttgaggtcaattgcaccattgttgcc
gataactggctagagctagaacgccttgctgcctacgttgaggagcatgatctgtcgacc
ccaccccgggtcatgttgcggttgacaccgggaattgaatgccacacccacgaatatatc
cgcaccgggcatctagacagtaaatttggctttgatccgcaacagtttccagagttgctc
cagtttgccaaggcgcatccagaactagactgggtcggactgcacgcccacattggctct
caaatttttgaggagcaaccccacttagacctctgtgatgtactggtggattggctggct
caagcccgtgcggcgatgctacccatgcgcgaactgaatgtagggggtggactgggcatt
cgttatgtagaatccgataatccgccggcgatcgcccactggacaaaggcaattagccat
caactgagccaagcctgtcagcaacgccatcttcccttaccaaaactcatctgtgagcca
ggtcgctccatcgtggggccggcggcagtgactgcctacactgtgggtagccgtaaggtg
attcctgagctacgcacctacatcgctgtggacggcggcatgtccgataatccacgaccg
atgacctatcaggcacaatatacagccctgtgtgctaatcgcatgaccaccgcagcgacg
gaaaccgtccgcgtagccggcaagcactgcgaatcgggcgatattctgctagcccatgct
accctaccgcccctacaagccaacgatattttagtggtggccagtacgggtgcctacaac
tacagcatggcctccaactacaatcgcgtgccgcggccagcggctgtcattgtctgtgat
ggcgaagctaacctgattctgcaacgggaaacctacgccgatttggtggctcacgatgtc
ctacccctgcgcttgagcacccctaccccttag
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