Thermostichus vulcanus: NIES2134_117980
Help
Entry
NIES2134_117980 CDS
T05980
Symbol
zam
Name
(GenBank) protein conferring resistance to acetazolamide Zam
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
tvn
Thermostichus vulcanus
Pathway
tvn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NIES2134_117980 (zam)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvn03019
]
NIES2134_117980 (zam)
03016 Transfer RNA biogenesis [BR:
tvn03016
]
NIES2134_117980 (zam)
Enzymes [BR:
tvn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NIES2134_117980 (zam)
Messenger RNA biogenesis [BR:
tvn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NIES2134_117980 (zam)
Transfer RNA biogenesis [BR:
tvn03016
]
Prokaryotic type
tRNA degradation factors
NIES2134_117980 (zam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
OB_HELZ2
Motif
Other DBs
NCBI-ProteinID:
BAY53119
LinkDB
All DBs
Position
1837737..1840001
Genome browser
AA seq
754 aa
AA seq
DB search
MHFTIASLLANFSEDKFVAPKVLEKKLGCDDPESQRELEIALDALERIGLLIKERGKYRR
ASDEGLIEARLRCSSKGFCFAIQDAEGAEDIFVREHQLSTAWNGDRVLVRVTREGRRKKS
PEGEVKLILERGNPSVIARVKQTEDGFRATPLDDRLLFEIALEPNDLVPDLSTVVDQLVH
VHIRRYPLGGYLPTGEIGQILGSDAQSAPILDLICCKHNLVRQFNPALRTAAATLNAQLE
TLDFSDRQDLRELVTITLVAPGQEPQVAFSLDGLGPDLWQLGIHISDVGGLLPRDELLDR
TARRQGMSLATPELSLPLLPQELETLRLLPGGDRAAISLLIVLNTAGEVQSYRIYRSCIR
VDACVTSEQVAATLALGDSSGDWLRALIHLANAVSQRRQARGSIEVTPAEALSLAYADEG
LAPAIFLPKVTPWTSLVILANELLGRHLAKLGVPALYRTQPVPELYGVQDFLKLCQNLNL
PLSLDHPSQVTPRDYQRFMAQLATSDLAALLQELLLDKLKPASDSPVVLTHFGLATAEGY
GHFCSPLQRYTDIVNQRILHLLLTEGRDRRGPRAKERVNLGDSSCLEQVNWTVFTTDIQR
EVDTLVKELAPHLQERERQTYTAWKDLVGLQRVRQVQACIGEVRPGIITGVQSYGFFVEL
LDFNVEGLVHVSSLKDDWYEYRAHAQTLTGRRNRLRYRLGDRVEVLIKNVDSYRQQVDLG
VMSGGSQATEEDLNGSSDSGEPLTPPEDDTTETL
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgcattttacgattgctagtctacttgccaactttagcgaagataaatttgttgccccc
aaagttctcgaaaaaaaactcggctgtgacgatcctgagagccagcgagagctggaaatt
gcccttgatgccctagaacgcattggcctgctcatcaaagaacggggcaagtatcgccgt
gccagtgatgaggggttgattgaagcgcgattgcgctgctcgagcaaaggcttttgcttt
gctatccaagatgccgagggtgcagaagatatctttgtacgtgagcatcaactcagtact
gcctggaatggcgatcgcgtgctggtgcgggttacccgtgaaggccgccgcaagaaatcg
ccagagggggaagtgaaactcatccttgagcggggcaatccctcggtgattgctcgagtg
aaacagacagaagatgggtttcgggcgacgcccctcgacgatcgcctgctctttgaaatt
gcccttgagcccaatgaccttgtgcccgacctatcgacggtggtggatcaactggtgcat
gttcacattcgccgctatcctttggggggctacctgcccacgggggaaattggccagatc
ctagggagtgatgcccaatcggccccaattcttgacttgatttgctgcaaacacaacctt
gtccgccaatttaatccggccctgcgcaccgccgctgccaccttgaatgcccagttggaa
accttggacttcagcgatcgccaagacttgcgggaactggtcaccattaccttagttgcc
cctggccaagagccccaagtggccttttccctcgatgggcttgggccagatctctggcag
ttggggattcacattagcgatgtggggggattacttccccgggatgaactgctggatcgc
acagctcgccgtcagggcatgagcctcgcgacccccgaacttagtttgcccctattgccg
caggaattagagacgctgcgcttgctgccggggggcgatcgcgctgccatttcgctgctg
attgtgctcaacactgccggcgaagttcagtcctacaggatttaccgcagttgtatccgc
gtcgatgcctgtgtcaccagtgaacaagtggcggctaccctagccctaggggacagttct
ggagattggttgcgggctttaattcaccttgccaatgccgtgagtcagcggcgccaggca
cgggggagtattgaagttaccccagcggaggccctgagccttgcctatgccgatgagggc
ctcgcccccgccattttcctaccaaaggtgaccccttggaccagcttggttattcttgcc
aatgaactcctgggccgtcatttggcgaagttgggcgtaccggctctctatcgcacgcag
cctgtacccgaactctatggggtgcaggattttctcaagctgtgccaaaatctgaacttg
cccttgagtctcgatcatccctcccaggtgacgccccgcgactatcagcggtttatggcg
caattggccacctcggatctggcagccctgttgcaggaactcttgctcgataaactgaag
cccgccagcgattcccctgtggtgctgacccactttggtttggccactgcggagggctat
ggccatttctgctcgccgctacaacgctacaccgatattgtcaatcagcggattttacac
cttctcctgacagaagggcgcgatcgccgcgggccacgggcaaaagagcgcgtcaatctt
ggcgattccagttgcttggagcaggtgaattggaccgttttcaccaccgacattcagcgg
gaggtggacactctcgttaaggaattagccccccacctccaagagcgggagcggcaaacc
tacaccgcttggaaggatctagtggggctgcaacgggtgcgccaggtccaagcctgtatt
ggcgaagtgcgtcccggcattattacgggcgtacagtcctatggcttctttgtcgaactg
ctggattttaatgtggagggtctagtccacgtcagttccctcaaggatgactggtatgaa
taccgcgcccatgcccaaacgttgacgggtcggcgtaatcgcttgcgttaccgcttgggc
gatcgcgttgaagtgctgattaaaaatgtggattcctatcgccagcaggtggacttaggg
gtcatgagtggtggctcgcaagcgacggaagaagacctcaacggcagcagtgacagcggc
gaacccctcacccctcctgaggatgacaccactgagacgctgtaa
DBGET
integrated database retrieval system
