Thermostichus vulcanus: NIES2134_119960
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Entry
NIES2134_119960 CDS
T05980
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
tvn
Thermostichus vulcanus
Pathway
tvn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tvn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NIES2134_119960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvn02000
]
NIES2134_119960
Transporters [BR:
tvn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NIES2134_119960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
SMC_N
AAA_29
AAA_22
ATP-synt_ab
Mg_chelatase
AAA_5
AAA_18
RsgA_GTPase
AAA
AAA_16
PRK
NB-ARC
AAA_13
AAA_33
NPHP3_N
NACHT
RHH_5
Motif
Other DBs
NCBI-ProteinID:
BAY52924
LinkDB
All DBs
Position
complement(2029502..2031097)
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AA seq
531 aa
AA seq
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MATLLELRELRVAYPRMETSSAATFVVDGVSFCVAAGERFGLVGASGCGKSTIGKAILRL
LPPGSQIFGQIALQGQSLLGLSASQLQRLRGEQIGLVFQDPMTRLNPLMSIYDHCDELLR
SHWFSWSRPQRRQRIIEVLERVKIPANRLHQYPHELSGGMRQRVAIALALLLNPPLIIAD
EPTTALDVTVAAEILEELTRLCQQEQRGLLLISHDLALMAKYCDRLAVMHQGKIVELGAA
HQVLQRPQHPYTQSLLAATQLTSPQPPPLDTAPELLRVENLQRHYRLGGWLQPQTTIRAV
DGVDLTLRRGETLGLVGESGCGKSTLSRLILQLIPANAGDVVFLGRSLTQLSAAQLRRTR
RDLQMIFQDPHACLNPKMTVAQNLLEPLLIHRLMAKRAAQERVREMLVQVELTPAEAYLH
RYPHALSGGQRQRVAIARALITHPQLVICDEPVSMLDAHIQAQVLGLMQELKEQLQLTYL
FITHDLAIARRFCDRVAVMYRGKIVELAPTAQLFAHPQHPYTQKLLAAALS
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcttttagaactcagggaactgcgggtcgcctaccctagaatggagacatca
tctgctgcaacattcgtagtggatggtgtttctttttgtgtggccgcaggggagcggttt
ggcttagtgggggcgtcgggttgtggcaagtccaccattggcaaggccattttgcggtta
ttgccgccggggtcgcagatttttggccagatcgcacttcaggggcaatcccttttggga
ctgagtgcttcccaattgcagcgactgcggggcgagcaaattggcttggtctttcaggat
ccgatgacgcgcctcaatccgctgatgagcatctatgaccactgcgatgagctattgcgg
agtcattggttttcttggagtcgtcctcaacggcggcagcgcatcattgaagtgctggag
cgggtgaaaattcctgccaatcgcctccatcaatacccccatgagttgagtggggggatg
cgtcaacgggtggcgatcgcccttgccttgttattgaacccacccctgatcattgccgat
gaaccgacaacggcgctggatgtgaccgtcgccgcagaaattctggaggaactcacgcgc
ctgtgccaacaggagcagcggggactgttactcatttcccatgatctggcattgatggcc
aagtattgcgatcgcctggcggtcatgcaccaaggcaaaattgtggaactgggagcggct
caccaagtgctgcaacggccacagcacccttatacccaatccttacttgcggctacccaa
ctcacctctccacagcctccacccttagacactgctccggaactgctgcgggttgagaat
ctacagcggcactaccgcttggggggatggttacaaccgcaaaccacgattcgggcggtg
gatggcgttgacctcacgctgcggcggggcgaaacccttggccttgtgggtgagtctggc
tgtggcaaaagtacactttcgcgcttaattctgcaactgattcccgccaatgccggtgac
gtggtctttttggggcgcagtttaactcaattgtcagcggcccaactgcgccgaacccgc
cgcgatctgcaaatgattttccaagacccccatgcctgcctaaaccccaaaatgaccgtg
gcgcaaaatttgctggagccactgctcattcatcggctgatggcgaaacgggcggcccag
gaacgggtgcgtgagatgttggtgcaggtggaattgaccccggctgaagcctacctgcat
cgctatccccatgccctgtcggggggacaacgccagcgggtggcgatcgcccgtgcccta
attacccacccccaactggtgatctgtgatgaaccggtgagtatgctcgatgcccatatt
caagcccaggtgctggggctaatgcaggagttaaaggaacagttgcaattgacctatctc
tttatcacccacgatctggcgatcgcccgtcgtttttgcgatcgcgttgcggtcatgtat
cgtggcaaaattgtcgaactcgcccccacggcacagctctttgctcatccgcagcatccc
tacacgcaaaaactcctagccgctgccttgtcttaa
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