Thermostichus vulcanus: NIES2134_120120
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Entry
NIES2134_120120 CDS
T05980
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
tvn
Thermostichus vulcanus
Pathway
tvn00521
Streptomycin biosynthesis
tvn00523
Polyketide sugar unit biosynthesis
tvn00541
Biosynthesis of various nucleotide sugars
tvn01100
Metabolic pathways
tvn01110
Biosynthesis of secondary metabolites
tvn01250
Biosynthesis of nucleotide sugars
Module
tvn_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
tvn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NIES2134_120120 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NIES2134_120120 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NIES2134_120120 (rfbC)
Enzymes [BR:
tvn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NIES2134_120120 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
zf-C2H2_ZNF462_11
Motif
Other DBs
NCBI-ProteinID:
BAY52908
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Position
complement(2045513..2046061)
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AA seq
182 aa
AA seq
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MVKVQPLAIADVLLLELQVFRDQRGFFLESYNQRAFMAATGLAVTFVQDNHSASQQGVLR
GLHYQHQHPQGKLIRVIEGKIFDVAVDLRRSSPTCGQWVGTWLSAENFQQLWIPPGFAHG
FWVQSATAQVLYKTTDYYHPGDEYTLLWNDPTVGIQWPIDSEPLLSAKDQQGKSFNELPL
FA
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaggtacaaccgctggcgatcgctgacgttctgctcttggaactgcaggtcttt
cgcgatcagcggggctttttcctagaaagctataaccaacgagcctttatggctgccaca
ggcttggcagtgacctttgtccaagataatcactccgcctcccagcagggggttttgcga
ggactccactaccagcaccaacacccccaaggcaaactgattcgcgttattgaaggaaaa
atttttgatgtcgccgttgatttgcggcgctcttcacccacctgtggccaatgggtggga
acttggttgagtgctgaaaacttccagcaattgtggattccccctggctttgcccacggc
ttctgggtgcaatcagccaccgcccaagtcctctacaaaacaacagactactaccatcca
ggggatgaatataccctactctggaatgacccaaccgttggtattcaatggcccattgac
agcgaacccctcctttctgccaaggatcaacagggcaaatcttttaacgaacttccccta
ttcgcctga
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